Information for 1-CACAGCTGGGAGT (Motif 1)

A G T C C G T A A G T C C G T A A C T G G T A C A C G T C T A G C T A G A C T G C G T A A T C G A C G T
Reverse Opposite:
G T C A A T G C A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A C T G A C G T A C T G
p-value:1e-17
log p-value:-4.036e+01
Information Content per bp:1.897
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.7 +/- 20.8bp
Average Position of motif in Background80.7 +/- 2.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC1/MA0696.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CACAGCTGGGAGT-
CACAGCGGGGGGTC
 A G T C C G T A A G T C C G T A A C T G G T A C A C G T C T A G C T A G A C T G C G T A A T C G A C G T A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CACAGCTGGGAGT
CACAGCAGGGGG-
 A G T C C G T A A G T C C G T A A C T G G T A C A C G T C T A G C T A G A C T G C G T A A T C G A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CACAGCTGGGAGT-
NCGCAGCGGGGGGTC
 A C G T A G T C C G T A A G T C C G T A A C T G G T A C A C G T C T A G C T A G A C T G C G T A A T C G A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CACAGCTGGGAGT
NAACAGCTGG----
 A C G T A G T C C G T A A G T C C G T A A C T G G T A C A C G T C T A G C T A G A C T G C G T A A T C G A C G T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CACAGCTGGGAGT
AACAGCTG-----
 A G T C C G T A A G T C C G T A A C T G G T A C A C G T C T A G C T A G A C T G C G T A A T C G A C G T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CACAGCTGGGAGT-
DCHCAGCAGGRGGCC
 A C G T A G T C C G T A A G T C C G T A A C T G G T A C A C G T C T A G C T A G A C T G C G T A A T C G A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CACAGCTGGGAGT
-HCAGCTGDTN--
 A G T C C G T A A G T C C G T A A C T G G T A C A C G T C T A G C T A G A C T G C G T A A T C G A C G T
A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CACAGCTGGGAGT
AACAGCTGCAG--
 A G T C C G T A A G T C C G T A A C T G G T A C A C G T C T A G C T A G A C T G C G T A A T C G A C G T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CACAGCTGGGAGT
GACAGCTGCAG--
 A G T C C G T A A G T C C G T A A C T G G T A C A C G T C T A G C T A G A C T G C G T A A T C G A C G T
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CACAGCTGGGAGT-
NCNCAGCGGGGGGTC
 A C G T A G T C C G T A A G T C C G T A A C T G G T A C A C G T C T A G C T A G A C T G C G T A A T C G A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C