Information for 6-GYTWGARAWRMTYMWC (Motif 6)

A C T G G A C T A C G T C G A T A C T G C G T A C T A G C G T A C G A T C T A G G T A C A C G T A G T C G T C A C G A T A G T C
Reverse Opposite:
A C T G C G T A A C G T C T A G C G T A A C T G A G T C C G T A A C G T A G T C C G A T A G T C C G T A C G T A C T A G A G T C
p-value:1e-9
log p-value:-2.283e+01
Information Content per bp:1.784
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif13.64%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.7 +/- 24.1bp
Average Position of motif in Background28.5 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GYTWGARAWRMTYMWC
CGGTTTCAAA--------
 A C G T A C G T A C T G G A C T A C G T C G A T A C T G C G T A C T A G C G T A C G A T C T A G G T A C A C G T A G T C G T C A C G A T A G T C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GYTWGARAWRMTYMWC---
----NAGATWNBNATCTNN
 A C T G G A C T A C G T C G A T A C T G C G T A C T A G C G T A C G A T C T A G G T A C A C G T A G T C G T C A C G A T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

PH0020.1_Dlx1/Jaspar

Match Rank:3
Score:0.48
Offset:2
Orientation:forward strand
Alignment:GYTWGARAWRMTYMWC
--CTGAGGTAATTAAT
 A C T G G A C T A C G T C G A T A C T G C G T A C T A G C G T A C G A T C T A G G T A C A C G T A G T C G T C A C G A T A G T C
A C G T A C G T A G T C A G C T C T A G T G C A C T A G C T A G G A C T T C G A C G T A C G A T A C G T C T G A C G T A A G C T

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:GYTWGARAWRMTYMWC
--TGGAAAA-------
 A C T G G A C T A C G T C G A T A C T G C G T A C T A G C G T A C G A T C T A G G T A C A C G T A G T C G T C A C G A T A G T C
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:5
Score:0.47
Offset:2
Orientation:forward strand
Alignment:GYTWGARAWRMTYMWC
--AAGATAAGATAACA
 A C T G G A C T A C G T C G A T A C T G C G T A C T A G C G T A C G A T C T A G G T A C A C G T A G T C G T C A C G A T A G T C
A C G T A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PH0014.1_Cphx/Jaspar

Match Rank:6
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:GYTWGARAWRMTYMWC
-NTTGATTNNATCAN-
 A C T G G A C T A C G T C G A T A C T G C G T A C T A G C G T A C G A T C T A G G T A C A C G T A G T C G T C A C G A T A G T C
A C G T C G A T A G C T C G A T C T A G C G T A A C G T A C G T A T G C T A C G G T C A A C G T A G T C C G T A G A C T A C G T

Hoxd3/MA0912.1/Jaspar

Match Rank:7
Score:0.46
Offset:2
Orientation:forward strand
Alignment:GYTWGARAWRMTYMWC--
--TTGAGTTAATTAACCT
 A C T G G A C T A C G T C G A T A C T G C G T A C T A G C G T A C G A T C T A G G T A C A C G T A G T C G T C A C G A T A G T C A C G T A C G T
A C G T A C G T G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

PH0079.1_Hoxd3/Jaspar

Match Rank:8
Score:0.46
Offset:2
Orientation:forward strand
Alignment:GYTWGARAWRMTYMWC--
--TTGAGTTAATTAACCT
 A C T G G A C T A C G T C G A T A C T G C G T A C T A G C G T A C G A T C T A G G T A C A C G T A G T C G T C A C G A T A G T C A C G T A C G T
A C G T A C G T G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.46
Offset:0
Orientation:reverse strand
Alignment:GYTWGARAWRMTYMWC
NATGGAAAAN------
 A C T G G A C T A C G T C G A T A C T G C G T A C T A G C G T A C G A T C T A G G T A C A C G T A G T C G T C A C G A T A G T C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0125.1_Gata3_2/Jaspar

Match Rank:10
Score:0.45
Offset:-2
Orientation:reverse strand
Alignment:--GYTWGARAWRMTYMWC----
NNNNNCGATANNATCTNNNNAN
 A C G T A C G T A C T G G A C T A C G T C G A T A C T G C G T A C T A G C G T A C G A T C T A G G T A C A C G T A G T C G T C A C G A T A G T C A C G T A C G T A C G T A C G T
C A G T C G T A C G T A T A C G A G C T G A T C C T A G T C G A A G C T C T G A T G C A C G T A C T G A C A G T G A T C C G A T T C G A A G T C G C T A C G T A T G C A C T G A