Information for 21-TAGGACATAC (Motif 52)

A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T A C T G A C G T A G T C A G T C A C G T C G T A
p-value:1e-3
log p-value:-6.965e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets5.0 +/- 0.0bp
Average Position of motif in Background90.5 +/- 4.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TAGGACATAC
TTATTAGTACATAN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A G T C
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TAGGACATAC--
CTACTAGGATGTNNTN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A G T C A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAGGACATAC
TRAGGTCA---
 A C G T A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A G T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TAGGACATAC
AAYTAGGTCA---
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A G T C
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAGGACATAC-----
TCTTTGGCGTACCCTAA
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TAGGACATAC
NACAGGAAAT--
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TAGGACATAC
-AGGTCA---
 A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A G T C
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

PB0115.1_Ehf_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TAGGACATAC--
AAGATCGGAANTNNNA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A G T C A C G T A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------TAGGACATAC
TATAAGTAGGTCAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A G T C
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TAGGACATAC---
ATTTACGACAAATAGC
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C C G T A A C G T C G T A A G T C A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C