Information for 20-GGCTATATTC (Motif 51)

A C T G A C T G A G T C A C G T C G T A A C G T C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C T G A G T C A G T C
p-value:1e-3
log p-value:-6.965e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.0 +/- 0.0bp
Average Position of motif in Background57.2 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGCTATATTC----
ATGGGATATATCCGCCT
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGCTATATTC---
-KCTATTTTTRGH
 A C T G A C T G A G T C A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGCTATATTC---
-GCTATTTTTGGM
 A C T G A C T G A G T C A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGCTATATTC--
--CTATTTTTGG
 A C T G A C T G A G T C A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGCTATATTC---
-GCTATTTTTAGC
 A C T G A C T G A G T C A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T A C G T
A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PB0171.1_Sox18_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGCTATATTC-----
GGACTGAATTCATGCC
 A C G T A C T G A C T G A G T C A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

Arid5a/MA0602.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGCTATATTC-
NNTNNCAATATTAG
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGCTATATTC-
NNTNNCAATATTAG
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGCTATATTC-----
TTCTATTTTTAGNNN
 A C T G A C T G A G T C A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGCTATATTC
GCNGCCATCTTG
 A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C G T C G T A A C G T A C G T A G T C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G