Information for 13-ATACACTAGG (Motif 42)

C G T A A C G T C G T A A G T C C G T A A G T C A C G T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C G T C G T A A C G T
p-value:1e-3
log p-value:-7.658e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATACACTAGG
NTTGATACATT---
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C C G T A A G T C A C G T C G T A A C T G A C T G
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATACACTAGG----
ATGTACAGTAGCAAAG
 A C G T A C G T C G T A A C G T C G T A A G T C C G T A A G T C A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ATACACTAGG
SSAATCCACANN-
 A C G T A C G T A C G T C G T A A C G T C G T A A G T C C G T A A G T C A C G T C G T A A C T G A C T G
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATACACTAGG----
ATTTACAGTAGCAAAA
 A C G T A C G T C G T A A C G T C G T A A G T C C G T A A G T C A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATACACTAGG----
NNTNNACAATGGGANNN
 A C G T A C G T A C G T C G T A A C G T C G T A A G T C C G T A A G T C A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------ATACACTAGG
ATTTGCATACAATGG-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C C G T A A G T C A C G T C G T A A C T G A C T G
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ATACACTAGG
TCCAATCCACA---
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C C G T A A G T C A C G T C G T A A C T G A C T G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ATACACTAGG--
CTCACACAATGGCGC
 A C G T A C G T A C G T C G T A A C G T C G T A A G T C C G T A A G T C A C G T C G T A A C T G A C T G A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATACACTAGG
MRSCACTYAA
 C G T A A C G T C G T A A G T C C G T A A G T C A C G T C G T A A C T G A C T G
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATACACTAGG
GAACAATGG-
 C G T A A C G T C G T A A G T C C G T A A G T C A C G T C G T A A C T G A C T G
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T