Information for 12-ACTCAACTAA (Motif 41)

C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C G T
p-value:1e-3
log p-value:-7.658e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 0.0bp
Average Position of motif in Background61.4 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACTCAACTAA
TAATCAATTA-
 A C G T C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A
C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ACTCAACTAA
AGCCACTCAAG---
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACTCAACTAA-
-GTTAACTAGN
 C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A A C G T
A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACTCAACTAA---
ACTTAGTTAACTAAAAA
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PH0006.1_Barhl2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACTCAACTAA---
AAAAACCAATTAAGAA
 A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PH0167.1_Tcf1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ACTCAACTAA---
CCTTAGTTAACTAAAAT
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACTCAACTAA
RSCACTYRAG---
 A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACTCAACTAA
AASCACTCAA----
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T

PH0136.1_Phox2b/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACTCAACTAA----
CGGAATTAATTAATAGG
 A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T A G C T C A G A C T G G C T A T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A G C T C T G A A T C G A T C G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACTCAACTAA
NSCACTYVAV---
 A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T C G T A C G T A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T