Information for 6-GTTAGCCTGA (Motif 36)

A C T G A C G T A C G T C G T A A C T G A G T C A G T C A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C T G A C T G A G T C A C G T C G T A C G T A A G T C
p-value:1e-3
log p-value:-7.658e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 0.0bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTTAGCCTGA
--TWGTCTGV
 A C T G A C G T A C G T C G T A A C T G A G T C A G T C A C G T A C T G C G T A
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTTAGCCTGA--
NAGGTCACNNTGACC
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

Spz1/MA0111.1/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTTAGCCTGA
GCTGTTACCCT--
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A G T C A G T C A C G T A C T G C G T A
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:4
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GTTAGCCTGA-
NNNTTAGTTAACTNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A G T C A G T C A C G T A C T G C G T A A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTTAGCCTGA----
---AGCCTCAGGCA
 A C T G A C G T A C G T C G T A A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTTAGCCTGA----
---TGCCTGAGGCN
 A C T G A C G T A C G T C G T A A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTTAGCCTGA------
-ATTGCCTGAGGCAAT
 A C T G A C G T A C G T C G T A A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PH0167.1_Tcf1/Jaspar

Match Rank:8
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GTTAGCCTGA-
NTTTTAGTTAACNNAGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A G T C A G T C A C G T A C T G C G T A A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GTTAGCCTGA----
---NGCCTGAGGCN
 A C T G A C G T A C G T C G T A A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTTAGCCTGA
--CAGCC---
 A C T G A C G T A C G T C G T A A C T G A G T C A G T C A C G T A C T G C G T A
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T