Information for 19-CTTKCDGCCCAGGAMA (Motif 28)

A G T C G A C T G A C T C A G T G T A C C G T A C A T G A G T C A T G C T A G C C T G A A C T G C T A G C G T A G T C A C G T A
Reverse Opposite:
A C G T C A G T G A C T A G T C G T A C A G C T A C T G A T C G T C A G G T A C G A C T C A T G G T C A C G T A C T G A T A C G
p-value:1e-5
log p-value:-1.186e+01
Information Content per bp:1.536
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif18.18%
Number of Background Sequences with motif265.8
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets54.2 +/- 24.0bp
Average Position of motif in Background47.5 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTTKCDGCCCAGGAMA
-NNNCTTTCCAGGAAA
 A G T C G A C T G A C T C A G T G T A C C G T A C A T G A G T C A T G C T A G C C T G A A C T G C T A G C G T A G T C A C G T A
A C G T G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

Bcl6/MA0463.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTTKCDGCCCAGGAMA
--NGCTTTCTAGGAAN
 A G T C G A C T G A C T C A G T G T A C C G T A C A T G A G T C A T G C T A G C C T G A A C T G C T A G C G T A G T C A C G T A
A C G T A C G T C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

STAT1/MA0137.3/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CTTKCDGCCCAGGAMA
-----TTTCCAGGAAA
 A G T C G A C T G A C T C A G T G T A C C G T A C A T G A G T C A T G C T A G C C T G A A C T G C T A G C G T A G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CTTKCDGCCCAGGAMA
-----TGCCCAGNHW-
 A G T C G A C T G A C T C A G T G T A C C G T A C A T G A G T C A T G C T A G C C T G A A C T G C T A G C G T A G T C A C G T A
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CTTKCDGCCCAGGAMA
------TTCCNGGAAG
 A G T C G A C T G A C T C A G T G T A C C G T A C A T G A G T C A T G C T A G C C T G A A C T G C T A G C G T A G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CTTKCDGCCCAGGAMA-
-----TTTCCNGGAAAN
 A G T C G A C T G A C T C A G T G T A C C G T A C A T G A G T C A T G C T A G C C T G A A C T G C T A G C G T A G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C

Stat4/MA0518.1/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CTTKCDGCCCAGGAMA---
-----TTTCCAGGAAATGG
 A G T C G A C T G A C T C A G T G T A C C G T A C A T G A G T C A T G C T A G C C T G A A C T G C T A G C G T A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:8
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CTTKCDGCCCAGGAMA---
-------NDCAGGAARTNN
 A G T C G A C T G A C T C A G T G T A C C G T A C A T G A G T C A T G C T A G C C T G A A C T G C T A G C G T A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTTKCDGCCCAGGAMA--
----ATTTCCNGGAAATN
 A G T C G A C T G A C T C A G T G T A C C G T A C A T G A G T C A T G C T A G C C T G A A C T G C T A G C G T A G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A C T A C G T A C G T G T A C G A T C G C T A C T A G C A T G C G T A C G T A C T G A G A C T T A C G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CTTKCDGCCCAGGAMA-
-------NACAGGAAAT
 A G T C G A C T G A C T C A G T G T A C C G T A C A T G A G T C A T G C T A G C C T G A A C T G C T A G C G T A G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T