Information for 11-TCHATVACATTGT (Motif 26)

A C G T A G T C G A C T C T G A A C G T T A C G G T C A A G T C C G T A C G A T C G A T A C T G A C G T
Reverse Opposite:
G T C A A G T C C G T A C G T A A C G T A C T G A C G T A G T C G T C A A G C T C G T A A C T G C G T A
p-value:1e-5
log p-value:-1.290e+01
Information Content per bp:1.761
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif13.64%
Number of Background Sequences with motif55.5
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets55.8 +/- 22.1bp
Average Position of motif in Background52.7 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox1/MA0870.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TCHATVACATTGT-
AACAATAACATTGTT
 A C G T A C G T A G T C G A C T C T G A A C G T T A C G G T C A A G T C C G T A C G A T C G A T A C T G A C G T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TCHATVACATTGT-
-----CTCATTGTC
 A C G T A G T C G A C T C T G A A C G T T A C G G T C A A G T C C G T A C G A T C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.62
Offset:6
Orientation:forward strand
Alignment:TCHATVACATTGT---
------CCATTGTTYB
 A C G T A G T C G A C T C T G A A C G T T A C G G T C A A G T C C G T A C G A T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TCHATVACATTGT
------ACAAAG-
 A C G T A G T C G A C T C T G A A C G T T A C G G T C A A G T C C G T A C G A T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TCHATVACATTGT
---AAAACAATGG
 A C G T A G T C G A C T C T G A A C G T T A C G G T C A A G T C C G T A C G A T C G A T A C T G A C G T
A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TCHATVACATTGT
---VRRACAAWGG
 A C G T A G T C G A C T C T G A A C G T T A C G G T C A A G T C C G T A C G A T C G A T A C T G A C G T
A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TCHATVACATTGT--
------CCATTGTTC
 A C G T A G T C G A C T C T G A A C G T T A C G G T C A A G T C C G T A C G A T C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

SOX21/MA0866.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCHATVACATTGT-
AACACTACCATTGTT
 A C G T A C G T A G T C G A C T C T G A A C G T T A C G G T C A A G T C C G T A C G A T C G A T A C T G A C G T A C G T
T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TCHATVACATTGT-----
---GHWACAWTGTWDCWA
 A C G T A G T C G A C T C T G A A C G T T A C G G T C A A G T C C G T A C G A T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TCHATVACATTGT
-----AACAAAGG
 A C G T A G T C G A C T C T G A A C G T T A C G G T C A A G T C C G T A C G A T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G