Information for 6-CASMCYSSMMCRC (Motif 20)

A G T C C G T A A T G C G T C A A G T C A G T C A T C G A T C G G T A C G T A C G T A C C T A G G T A C
Reverse Opposite:
C A T G A G T C A C T G A C T G A C T G A T G C A T G C C T A G A C T G A C G T A T C G A C G T A C T G
p-value:1e-6
log p-value:-1.471e+01
Information Content per bp:1.762
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif13.64%
Number of Background Sequences with motif30.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets56.0 +/- 19.1bp
Average Position of motif in Background51.3 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR1/MA0162.2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CASMCYSSMMCRC-
CCCCCGCCCCCGCC
 A G T C C G T A A T G C G T C A A G T C A G T C A T C G A T C G G T A C G T A C G T A C C T A G G T A C A C G T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CASMCYSSMMCRC
GGACACACCCCC----
 A C G T A C G T A C G T A G T C C G T A A T G C G T C A A G T C A G T C A T C G A T C G G T A C G T A C G T A C C T A G G T A C
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CASMCYSSMMCRC
AGCAACAGCCGCACC---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C G T C A A G T C A G T C A T C G A T C G G T A C G T A C G T A C C T A G G T A C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CASMCYSSMMCRC
TCAGTCTT------
 A C G T A G T C C G T A A T G C G T C A A G T C A G T C A T C G A T C G G T A C G T A C G T A C C T A G G T A C
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CASMCYSSMMCRC---
TCACCCCGCCCCAAATT
 A C G T A G T C C G T A A T G C G T C A A G T C A G T C A T C G A T C G G T A C G T A C G T A C C T A G G T A C A C G T A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

ZNF740/MA0753.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CASMCYSSMMCRC
---CCCCCCCCAC
 A G T C C G T A A T G C G T C A A G T C A G T C A T C G A T C G G T A C G T A C G T A C C T A G G T A C
A C G T A C G T A C G T T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CASMCYSSMMCRC-
--YCCGCCCACGCN
 A G T C C G T A A T G C G T C A A G T C A G T C A T C G A T C G G T A C G T A C G T A C C T A G G T A C A C G T
A C G T A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CASMCYSSMMCRC-
----CRCCCACGCA
 A G T C C G T A A T G C G T C A A G T C A G T C A T C G A T C G G T A C G T A C G T A C C T A G G T A C A C G T
A C G T A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CASMCYSSMMCRC
CCAGACRSVB----
 A C G T A G T C C G T A A T G C G T C A A G T C A G T C A T C G A T C G G T A C G T A C G T A C C T A G G T A C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CASMCYSSMMCRC
BCAGACWA------
 A C G T A G T C C G T A A T G C G T C A A G T C A G T C A T C G A T C G G T A C G T A C G T A C C T A G G T A C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T