Information for 13-CACKTYTRWSAYAWAS (Motif 16)

A G T C C G T A A G T C C A G T A C G T A G C T A C G T C T A G C G A T A T G C G T C A A G C T C G T A G C A T C G T A A T G C
Reverse Opposite:
A T C G A C G T C G A T A C G T C T G A A C G T A T C G C G T A A G T C C G T A C T G A G T C A G T A C A C T G A C G T A C T G
p-value:1e-6
log p-value:-1.606e+01
Information Content per bp:1.792
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.5 +/- 17.5bp
Average Position of motif in Background38.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CACKTYTRWSAYAWAS
GCACGTAY---------
 A C G T A G T C C G T A A G T C C A G T A C G T A G C T A C G T C T A G C G A T A T G C G T C A A G C T C G T A G C A T C G T A A T G C
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CACKTYTRWSAYAWAS
GCACGTNC---------
 A C G T A G T C C G T A A G T C C A G T A C G T A G C T A C G T C T A G C G A T A T G C G T C A A G C T C G T A G C A T C G T A A T G C
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CACKTYTRWSAYAWAS
GGCACGTGTC--------
 A C G T A C G T A G T C C G T A A G T C C A G T A C G T A G C T A C G T C T A G C G A T A T G C G T C A A G C T C G T A G C A T C G T A A T G C
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CACKTYTRWSAYAWAS
GCACGTACCC-------
 A C G T A G T C C G T A A G T C C A G T A C G T A G C T A C G T C T A G C G A T A T G C G T C A A G C T C G T A G C A T C G T A A T G C
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CACKTYTRWSAYAWAS
CACGTG----------
 A G T C C G T A A G T C C A G T A C G T A G C T A C G T C T A G C G A T A T G C G T C A A G C T C G T A G C A T C G T A A T G C
A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CACKTYTRWSAYAWAS
GCACGTGT---------
 A C G T A G T C C G T A A G T C C A G T A C G T A G C T A C G T C T A G C G A T A T G C G T C A A G C T C G T A G C A T C G T A A T G C
A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CACKTYTRWSAYAWAS
CACGTGBN--------
 A G T C C G T A A G T C C A G T A C G T A G C T A C G T C T A G C G A T A T G C G T C A A G C T C G T A G C A T C G T A A T G C
G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CACKTYTRWSAYAWAS
BGCACGTA----------
 A C G T A C G T A G T C C G T A A G T C C A G T A C G T A G C T A C G T C T A G C G A T A T G C G T C A A G C T C G T A G C A T C G T A A T G C
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CACKTYTRWSAYAWAS
AACACGTGTT--------
 A C G T A C G T A G T C C G T A A G T C C A G T A C G T A G C T A C G T C T A G C G A T A T G C G T C A A G C T C G T A G C A T C G T A A T G C
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CACKTYTRWSAYAWAS
GCCACGTGT---------
 A C G T A C G T A G T C C G T A A G T C C A G T A C G T A G C T A C G T C T A G C G A T A T G C G T C A A G C T C G T A G C A T C G T A A T G C
A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T