Information for 4-CABGCATGTCCTC (Motif 11)

G T A C C G T A A T C G C T A G A T G C C G T A A G C T A C T G A C G T A G T C A G T C A C G T A G T C
Reverse Opposite:
C T A G C G T A A C T G C T A G G T C A A G T C C T G A A C G T A T C G G A T C T A G C C G A T A C T G
p-value:1e-11
log p-value:-2.745e+01
Information Content per bp:1.753
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets58.0 +/- 19.7bp
Average Position of motif in Background34.8 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:CABGCATGTCCTC-
------TGACCTYA
 G T A C C G T A A T C G C T A G A T G C C G T A A G C T A C T G A C G T A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CABGCATGTCCTC-
----BNTGDCCTTG
 G T A C C G T A A T C G C T A G A T G C C G T A A G C T A C T G A C G T A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CABGCATGTCCTC-
----CACTTCCTCT
 G T A C C G T A A T C G C T A G A T G C C G T A A G C T A C T G A C G T A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CABGCATGTCCTC
---GCACGTNC--
 G T A C C G T A A T C G C T A G A T G C C G T A A G C T A C T G A C G T A G T C A G T C A C G T A G T C
A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CABGCATGTCCTC-----
-NNNNATGACCTTGANTN
 G T A C C G T A A T C G C T A G A T G C C G T A A G C T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CABGCATGTCCTC
---GCACGTACCC
 G T A C C G T A A T C G C T A G A T G C C G T A A G C T A C T G A C G T A G T C A G T C A C G T A G T C
A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CABGCATGTCCTC
---GCACGTAY--
 G T A C C G T A A T C G C T A G A T G C C G T A A G C T A C T G A C G T A G T C A G T C A C G T A G T C
A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CABGCATGTCCTC
-----GTGACCTT
 G T A C C G T A A T C G C T A G A T G C C G T A A G C T A C T G A C G T A G T C A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

Myc/MA0147.2/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CABGCATGTCCTC
---CCATGTGCTT
 G T A C C G T A A T C G C T A G A T G C C G T A A G C T A C T G A C G T A G T C A G T C A C G T A G T C
A C G T A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CABGCATGTCCTC--
-----ATGACCTTGA
 G T A C C G T A A T C G C T A G A T G C C G T A A G C T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A