Information for 5-ARCCCMRRSAGSCAGG (Motif 16)

C G T A C T A G A G T C A G T C A G T C G T A C C T A G C T G A T A G C C G T A A C T G A T G C A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A T C G A G T C A C G T A T C G G A C T G A T C A C T G A C T G A C T G A C T G A G T C A C G T
p-value:1e-3
log p-value:-8.895e+00
Information Content per bp:1.845
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.5 +/- 0.5bp
Average Position of motif in Background52.3 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ARCCCMRRSAGSCAGG--
---SCAGYCADGCATGAC
 C G T A C T A G A G T C A G T C A G T C G T A C C T A G C T G A T A G C C G T A A C T G A T G C A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.53
Offset:8
Orientation:forward strand
Alignment:ARCCCMRRSAGSCAGG---
--------AAGGCAAGTGT
 C G T A C T A G A G T C A G T C A G T C G T A C C T A G C T G A T A G C C G T A A C T G A T G C A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.50
Offset:11
Orientation:forward strand
Alignment:ARCCCMRRSAGSCAGG-----
-----------VCAGGTRDRY
 C G T A C T A G A G T C A G T C A G T C G T A C C T A G C T G A T A G C C G T A A C T G A T G C A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-ARCCCMRRSAGSCAGG
ATTTCCCAGVAKSCY--
 A C G T C G T A C T A G A G T C A G T C A G T C G T A C C T A G C T G A T A G C C G T A A C T G A T G C A G T C C G T A A C T G A C T G
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.48
Offset:10
Orientation:reverse strand
Alignment:ARCCCMRRSAGSCAGG----
----------NNCAGGTGNN
 C G T A C T A G A G T C A G T C A G T C G T A C C T A G C T G A T A G C C G T A A C T G A T G C A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:6
Score:0.48
Offset:1
Orientation:forward strand
Alignment:ARCCCMRRSAGSCAGG
-TGCCCTGAGGGCA--
 C G T A C T A G A G T C A G T C A G T C G T A C C T A G C T G A T A G C C G T A A C T G A T G C A G T C C G T A A C T G A C T G
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.47
Offset:10
Orientation:forward strand
Alignment:ARCCCMRRSAGSCAGG---
----------AACAGGTGT
 C G T A C T A G A G T C A G T C A G T C G T A C C T A G C T G A T A G C C G T A A C T G A T G C A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.47
Offset:10
Orientation:reverse strand
Alignment:ARCCCMRRSAGSCAGG----
----------GACAGGTGTN
 C G T A C T A G A G T C A G T C A G T C G T A C C T A G C T G A T A G C C G T A A C T G A T G C A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:ARCCCMRRSAGSCAGG
TGCCCAGNHW------
 C G T A C T A G A G T C A G T C A G T C G T A C C T A G C T G A T A G C C G T A A C T G A T G C A G T C C G T A A C T G A C T G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.47
Offset:7
Orientation:reverse strand
Alignment:ARCCCMRRSAGSCAGG
-------BCAGACWA-
 C G T A C T A G A G T C A G T C A G T C G T A C C T A G C T G A T A G C C G T A A C T G A T G C A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T