Information for 1-GTTGCKTTGGCTGGAG (Motif 1)

C T A G G A C T A C G T A C T G A G T C C A T G C A G T A C G T C T A G A C T G A T G C A C G T A C T G A C T G C T G A A C T G
Reverse Opposite:
G T A C A G C T G T A C A G T C C G T A A T C G G T A C G A T C C G T A G T C A G T A C C T A G A G T C C G T A C G T A A G T C
p-value:1e-13
log p-value:-3.118e+01
Information Content per bp:1.766
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 30.1bp
Average Position of motif in Background43.7 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GTTGCKTTGGCTGGAG
------TWGTCTGV--
 C T A G G A C T A C G T A C T G A G T C C A T G C A G T A C G T C T A G A C T G A T G C A C G T A C T G A C T G C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTTGCKTTGGCTGGAG
ANTCCTTTGTCTNNNN
 C T A G G A C T A C G T A C T G A G T C C A T G C A G T A C G T C T A G A C T G A T G C A C G T A C T G A C T G C T G A A C T G
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GTTGCKTTGGCTGGAG---
--NNTNNTGTCTGGNNTNG
 C T A G G A C T A C G T A C T G A G T C C A T G C A G T A C G T C T A G A C T G A T G C A C G T A C T G A C T G C T G A A C T G A C G T A C G T A C G T
A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

E2F8/MA0865.1/Jaspar

Match Rank:4
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:GTTGCKTTGGCTGGAG-
-----TTTGGCGGGAAA
 C T A G G A C T A C G T A C T G A G T C C A T G C A G T A C G T C T A G A C T G A T G C A C G T A C T G A C T G C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:GTTGCKTTGGCTGGAG
--------NGCTN---
 C T A G G A C T A C G T A C T G A G T C C A T G C A G T A C G T C T A G A C T G A T G C A C G T A C T G A C T G C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:6
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GTTGCKTTGGCTGGAG
CAATGCATTGTGGGTA-
 A C G T C T A G G A C T A C G T A C T G A G T C C A T G C A G T A C G T C T A G A C T G A T G C A C G T A C T G A C T G C T G A A C T G
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:GTTGCKTTGGCTGGAG-
-------TGGGTGTGGC
 C T A G G A C T A C G T A C T G A G T C C A T G C A G T A C G T C T A G A C T G A T G C A C G T A C T G A C T G C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

EGR3/MA0732.1/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GTTGCKTTGGCTGGAG
ANTGCGTGGGCGTNN-
 C T A G G A C T A C G T A C T G A G T C C A T G C A G T A C G T C T A G A C T G A T G C A C G T A C T G A C T G C T G A A C T G
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.48
Offset:9
Orientation:forward strand
Alignment:GTTGCKTTGGCTGGAG
---------GCTGTG-
 C T A G G A C T A C G T A C T G A G T C C A T G C A G T A C G T C T A G A C T G A T G C A C G T A C T G A C T G C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----GTTGCKTTGGCTGGAG
NNTGTTTATTTTGGCA----
 A C G T A C G T A C G T A C G T C T A G G A C T A C G T A C T G A G T C C A T G C A G T A C G T C T A G A C T G A T G C A C G T A C T G A C T G C T G A A C T G
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T A C G T A C G T A C G T