Information for 9-TGARGTKCAGCCC (Motif 17)

A C G T A C T G C G T A C T A G A T C G C G A T A C G T A G T C C G T A A C T G A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A G T C C G A T A C T G T G C A C G T A A T G C A G T C A C G T A G T C C G T A
p-value:1e-8
log p-value:-1.994e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.7 +/- 17.3bp
Average Position of motif in Background52.1 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGARGTKCAGCCC
---GGTCCCGCCC
 A C G T A C T G C G T A C T A G A T C G C G A T A C G T A G T C C G T A A C T G A G T C A G T C A G T C
A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGARGTKCAGCCC
TGACGT-------
 A C G T A C T G C G T A C T A G A T C G C G A T A C G T A G T C C G T A A C T G A G T C A G T C A G T C
A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGARGTKCAGCCC
TGAGTGACAGSC-
 A C G T A C T G C G T A C T A G A T C G C G A T A C G T A G T C C G T A A C T G A G T C A G T C A G T C
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.54
Offset:7
Orientation:forward strand
Alignment:TGARGTKCAGCCC
-------CAGCC-
 A C G T A C T G C G T A C T A G A T C G C G A T A C G T A G T C C G T A A C T G A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.53
Offset:7
Orientation:forward strand
Alignment:TGARGTKCAGCCC---
-------CTGCCCGCA
 A C G T A C T G C G T A C T A G A T C G C G A T A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TGARGTKCAGCCC---
--NAGCCCCGCCCCCN
 A C G T A C T G C G T A C T A G A T C G C G A T A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TGARGTKCAGCCC--
---GGCCCCGCCCCC
 A C G T A C T G C G T A C T A G A T C G C G A T A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TGARGTKCAGCCC---
----GCTCCGCCCMCY
 A C G T A C T G C G T A C T A G A T C G C G A T A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TGARGTKCAGCCC-
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A C T G C G T A C T A G A T C G C G A T A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGARGTKCAGCCC
NTCAAGTGG-----
 A C G T A C G T A C T G C G T A C T A G A T C G C G A T A C G T A G T C C G T A A C T G A G T C A G T C A G T C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T