Information for 5-CHAACGCTCTTTT (Motif 13)

A G T C G C T A C G T A C T G A G T A C A C T G A G T C A C G T G T A C A G C T A C G T A C G T G A C T
Reverse Opposite:
C T G A C G T A C G T A C T G A A C T G C G T A A C T G A G T C C A T G A G C T A C G T C A G T A C T G
p-value:1e-10
log p-value:-2.304e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.3 +/- 15.1bp
Average Position of motif in Background55.9 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CHAACGCTCTTTT----
-----KCTATTTTTRGH
 A G T C G C T A C G T A C T G A G T A C A C T G A G T C A C G T G T A C A G C T A C G T A C G T G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CHAACGCTCTTTT----
-----GCTATTTTTGGM
 A G T C G C T A C G T A C T G A G T A C A C T G A G T C A C G T G T A C A G C T A C G T A C G T G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CHAACGCTCTTTT----
-----GCTATTTTTAGC
 A G T C G C T A C G T A C T G A G T A C A C T G A G T C A C G T G T A C A G C T A C G T A C G T G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CHAACGCTCTTTT---
------CTATTTTTGG
 A G T C G C T A C G T A C T G A G T A C A C T G A G T C A C G T G T A C A G C T A C G T A C G T G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CHAACGCTCTTTT------
----TTCTATTTTTAGNNN
 A G T C G C T A C G T A C T G A G T A C A C T G A G T C A C G T G T A C A G C T A C G T A C G T G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Tcf21/MA0832.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CHAACGCTCTTTT
NCAACAGCTGTTGC
 A C G T A G T C G C T A C G T A C T G A G T A C A C T G A G T C A C G T G T A C A G C T A C G T A C G T G A C T
T C G A A G T C C T G A T G C A A G T C C G T A T A C G G T A C A C G T A C T G A C G T G A C T C T A G A G T C

MEF2B/MA0660.1/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CHAACGCTCTTTT----
-----GCTATTTATAGC
 A G T C G C T A C G T A C T G A G T A C A C T G A G T C A C G T G T A C A G C T A C G T A C G T G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

PB0146.1_Mafk_2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CHAACGCTCTTTT---
-CCTTGCAATTTTTNN
 A G T C G C T A C G T A C T G A G T A C A C T G A G T C A C G T G T A C A G C T A C G T A C G T G A C T A C G T A C G T A C G T
A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CHAACGCTCTTTT
----NGCTN----
 A G T C G C T A C G T A C T G A G T A C A C T G A G T C A C G T G T A C A G C T A C G T A C G T G A C T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CHAACGCTCTTTT----
-----TCTATTTATAGN
 A G T C G C T A C G T A C T G A G T A C A C T G A G T C A C G T G T A C A G C T A C G T A C G T G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T