Information for 2-CCCGTGCACTCCG (Motif 5)

A G T C A G T C A G T C A C T G A C G T A C T G T A G C G T C A A G T C C G A T A G T C A G T C A T C G
Reverse Opposite:
A T G C A C T G A C T G C G T A A C T G A C G T A C T G A G T C C G T A G T A C A C T G A C T G A C T G
p-value:1e-11
log p-value:-2.699e+01
Information Content per bp:1.882
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.7 +/- 20.7bp
Average Position of motif in Background44.1 +/- 48.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes1/MA1099.1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCCGTGCACTCCG
NNCGCGTGNN-----
 A C G T A C G T A G T C A G T C A G T C A C T G A C G T A C T G T A G C G T C A A G T C C G A T A G T C A G T C A T C G
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCCGTGCACTCCG
CCCCCTTGGGCCCC-
 A C G T A C G T A G T C A G T C A G T C A C T G A C G T A C T G T A G C G T C A A G T C C G A T A G T C A G T C A T C G
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCCGTGCACTCCG
ACACGTGC------
 A C G T A G T C A G T C A G T C A C T G A C G T A C T G T A G C G T C A A G T C C G A T A G T C A G T C A T C G
G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCCGTGCACTCCG
TCACGTGC------
 A C G T A G T C A G T C A G T C A C T G A C G T A C T G T A G C G T C A A G T C C G A T A G T C A G T C A T C G
G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCCGTGCACTCCG
ACCACGTGCC-----
 A C G T A C G T A G T C A G T C A G T C A C T G A C G T A C T G T A G C G T C A A G T C C G A T A G T C A G T C A T C G
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T A C G T A C G T A C G T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCCGTGCACTCCG
KCACGTGMCN----
 A C G T A G T C A G T C A G T C A C T G A C G T A C T G T A G C G T C A A G T C C G A T A G T C A G T C A T C G
C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCCGTGCACTCCG
TGACCTTGACCT---
 A C G T A C G T A G T C A G T C A G T C A C T G A C G T A C T G T A G C G T C A A G T C C G A T A G T C A G T C A T C G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T

Tcfl5/MA0632.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCGTGCACTCCG
GGCACGTGCC-----
 A C G T A C G T A G T C A G T C A G T C A C T G A C G T A C T G T A G C G T C A A G T C C G A T A G T C A G T C A T C G
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCCGTGCACTCCG
CACGTGBN-----
 A G T C A G T C A G T C A C T G A C G T A C T G T A G C G T C A A G T C C G A T A G T C A G T C A T C G
G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T A C G T A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCGTGCACTCCG
GACACGTGCC-----
 A C G T A C G T A G T C A G T C A G T C A C T G A C G T A C T G T A G C G T C A A G T C C G A T A G T C A G T C A T C G
T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C A C G T A C G T A C G T A C G T A C G T