Information for 4-GAAGAAAAACAAC (Motif 9)

A C T G C T G A C G T A A C T G C T G A C G T A C G T A C G T A C G T A G T A C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A C G T A C G T A C G T C G A T A G C T A G T C A C G T A G C T A G T C
p-value:1e-10
log p-value:-2.517e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.6 +/- 22.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxj3/MA0851.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GAAGAAAAACAAC---
AAAAAGTAAACAAACAC
 A C G T A C T G C T G A C G T A A C T G C T G A C G T A C G T A C G T A C G T A G T A C C G T A C G T A A G T C A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GAAGAAAAACAAC---
AAAAAGTAAACAAACAC
 A C G T A C T G C T G A C G T A A C T G C T G A C G T A C G T A C G T A C G T A G T A C C G T A C G T A A G T C A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

FOXF2/MA0030.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAAGAAAAACAAC
CAAACGTAAACAAT
 A C G T A C T G C T G A C G T A A C T G C T G A C G T A C G T A C G T A C G T A G T A C C G T A C G T A A G T C
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

Foxk1/MA0852.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAAGAAAAACAAC---
AAAATGTAAACAAACAG
 A C G T A C T G C T G A C G T A A C T G C T G A C G T A C G T A C G T A C G T A G T A C C G T A C G T A A G T C A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAAGAAAAACAAC---
AAAATGTAAACAAACAG
 A C G T A C T G C T G A C G T A A C T G C T G A C G T A C G T A C G T A C G T A G T A C C G T A C G T A A G T C A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAAGAAAAACAAC-
CAAAAGTAAACAAAG
 A C G T A C T G C T G A C G T A A C T G C T G A C G T A C G T A C G T A C G T A G T A C C G T A C G T A A G T C A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

Foxj2/MA0614.1/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GAAGAAAAACAAC
----GTAAACAA-
 A C T G C T G A C G T A A C T G C T G A C G T A C G T A C G T A C G T A G T A C C G T A C G T A A G T C
A C G T A C G T A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAAGAAAAACAAC---
GTTAAAAAAAAAAATTA
 A C G T A C T G C T G A C G T A A C T G C T G A C G T A C G T A C G T A C G T A G T A C C G T A C G T A A G T C A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GAAGAAAAACAAC
--AAATAAACA--
 A C T G C T G A C G T A A C T G C T G A C G T A C G T A C G T A C G T A G T A C C G T A C G T A A G T C
A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GAAGAAAAACAAC
----GTAAACAA-
 A C T G C T G A C G T A A C T G C T G A C G T A C G T A C G T A C G T A G T A C C G T A C G T A A G T C
A C G T A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T