Information for 2-TCWYTTSGGTCTK (Motif 3)

A C G T A G T C C G A T A G T C A C G T A C G T A T C G A C T G C T A G A C G T A G T C A C G T A C T G
Reverse Opposite:
G T A C C G T A A C T G C G T A A G T C A G T C A T G C C G T A C G T A T C A G C G T A C T A G C G T A
p-value:1e-13
log p-value:-3.104e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.7 +/- 22.7bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LEF1/MA0768.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCWYTTSGGTCTK-
AACCCTTTGATCTTT
 A C G T A C G T A G T C C G A T A G T C A C G T A C G T A T C G A C T G C T A G A C G T A G T C A C G T A C T G A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

EBF1/MA0154.3/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCWYTTSGGTCTK
ANTCCCTNGGGAAT-
 A C G T A C G T A C G T A G T C C G A T A G T C A C G T A C G T A T C G A C T G C T A G A C G T A G T C A C G T A C T G
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TCWYTTSGGTCTK-
------CTGTCTGG
 A C G T A G T C C G A T A G T C A C G T A C G T A T C G A C T G C T A G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Tcf7/MA0769.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TCWYTTSGGTCTK-
--CCTTTGATCTTT
 A C G T A G T C C G A T A G T C A C G T A C G T A T C G A C T G C T A G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TCWYTTSGGTCTK--
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A G T C C G A T A G T C A C G T A C G T A T C G A C T G C T A G A C G T A G T C A C G T A C T G A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCWYTTSGGTCTK
TNCCTTTGATGT-
 A C G T A G T C C G A T A G T C A C G T A C G T A T C G A C T G C T A G A C G T A G T C A C G T A C T G
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCWYTTSGGTCTK
--TTTGCGGTTT-
 A C G T A G T C C G A T A G T C A C G T A C G T A T C G A C T G C T A G A C G T A G T C A C G T A C T G
A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TCWYTTSGGTCTK-
----VBSYGTCTGG
 A C G T A G T C C G A T A G T C A C G T A C G T A T C G A C T G C T A G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCWYTTSGGTCTK------
--NNTNNTGTCTGGNNTNG
 A C G T A G T C C G A T A G T C A C G T A C G T A T C G A C T G C T A G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TCWYTTSGGTCTK
---NRRGGGTCTT
 A C G T A G T C C G A T A G T C A C G T A C G T A T C G A C T G C T A G A C G T A G T C A C G T A C T G
A C G T A C G T A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T