Information for 8-AARATGAASA (Motif 16)

T C G A G T C A C T G A C T G A C A G T A C T G C G T A G T C A A T C G G C T A
Reverse Opposite:
C G A T T A G C C A G T G A C T T G A C G T C A G A C T G A C T C A G T A G C T
p-value:1e-9
log p-value:-2.213e+01
Information Content per bp:1.646
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.97%
Number of Background Sequences with motif488.1
Percentage of Background Sequences with motif1.03%
Average Position of motif in Targets53.5 +/- 21.8bp
Average Position of motif in Background50.6 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXC2/MA0846.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AARATGAASA--
TAAGTAAACAAA
 T C G A G T C A C T G A C T G A C A G T A C T G C G T A G T C A A T C G G C T A A C G T A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AARATGAASA
AAAGTAAACA
 T C G A G T C A C T G A C T G A C A G T A C T G C G T A G T C A A T C G G C T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Foxk1/MA0852.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AARATGAASA-----
AAAATGTAAACAAACAG
 A C G T A C G T T C G A G T C A C T G A C T G A C A G T A C T G C G T A G T C A A T C G G C T A A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AARATGAASA-----
AAAATGTAAACAAACAG
 A C G T A C G T T C G A G T C A C T G A C T G A C A G T A C T G C G T A G T C A A T C G G C T A A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0019.1_Foxl1_1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AARATGAASA-----
TAAATGTAAACAAAGGT
 A C G T A C G T T C G A G T C A C T G A C T G A C A G T A C T G C G T A G T C A A T C G G C T A A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AARATGAASA
AAAGTAAACA
 T C G A G T C A C T G A C T G A C A G T A C T G C G T A G T C A A T C G G C T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AARATGAASA--
WWTRTAAACAVG
 T C G A G T C A C T G A C T G A C A G T A C T G C G T A G T C A A T C G G C T A A C G T A C G T
C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AARATGAASA
-AAATAAACA
 T C G A G T C A C T G A C T G A C A G T A C T G C G T A G T C A A T C G G C T A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

Foxj3/MA0851.1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AARATGAASA-----
AAAAAGTAAACAAACAC
 A C G T A C G T T C G A G T C A C T G A C T G A C A G T A C T G C G T A G T C A A T C G G C T A A C G T A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AARATGAASA-----
AAAAAGTAAACAAACAC
 A C G T A C G T T C G A G T C A C T G A C T G A C A G T A C T G C G T A G T C A A T C G G C T A A C G T A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C