Information for 4-CCGCCTGGAA (Motif 14)

A G T C A G T C A T C G G A T C A G T C C G A T A T C G A T C G T C G A C G T A
Reverse Opposite:
G C A T A G C T A T G C A T G C C G T A A C T G C T A G T A G C C T A G A C T G
p-value:1e-8
log p-value:-2.041e+01
Information Content per bp:1.837
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif147.3
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets44.6 +/- 21.2bp
Average Position of motif in Background49.8 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCGCCTGGAA
CTGTCTGG--
 A G T C A G T C A T C G G A T C A G T C C G A T A T C G A T C G T C G A C G T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCGCCTGGAA-
-GGTCTGGCAT
 A G T C A G T C A T C G G A T C A G T C C G A T A T C G A T C G T C G A C G T A A C G T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCGCCTGGAA
VBSYGTCTGG--
 A C G T A C G T A G T C A G T C A T C G G A T C A G T C C G A T A T C G A T C G T C G A C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCGCCTGGAA---
---CCWGGAATGY
 A G T C A G T C A T C G G A T C A G T C C G A T A T C G A T C G T C G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCGCCTGGAA
CGCCCCCTGACA
 A C G T A C G T A G T C A G T C A T C G G A T C A G T C C G A T A T C G A T C G T C G A C G T A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCGCCTGGAA
CTTCCNGGAA
 A G T C A G T C A T C G G A T C A G T C C G A T A T C G A T C G T C G A C G T A
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCGCCTGGAA
NNCACCTGNN-
 A C G T A G T C A G T C A T C G G A T C A G T C C G A T A T C G A T C G T C G A C G T A
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCGCCTGGAA---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A G T C A G T C A T C G G A T C A G T C C G A T A T C G A T C G T C G A C G T A A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCGCCTGGAA---
---NCTGGAATGC
 A G T C A G T C A T C G G A T C A G T C C G A T A T C G A T C G T C G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCGCCTGGAA--
-----TGGAAAA
 A G T C A G T C A T C G G A T C A G T C C G A T A T C G A T C G T C G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A