Information for 4-GSKCCMKSAKGCCGGG (Motif 5)

A C T G A T C G A C T G A T G C A G T C G T A C A C T G A T G C G T C A A C G T A C T G A G T C A G T C A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C T G A C T G A G T C G T C A A C G T A T C G G T A C A C T G C T A G A T C G G T A C A T G C A G T C
p-value:1e-11
log p-value:-2.660e+01
Information Content per bp:1.841
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.1 +/- 27.3bp
Average Position of motif in Background58.7 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GSKCCMKSAKGCCGGG-----
-------CAGGCCNNGGCCNN
 A C T G A T C G A C T G A T G C A G T C G T A C A C T G A T G C G T C A A C G T A C T G A G T C A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GSKCCMKSAKGCCGGG-----
----NAGANTGGCGGGGNGNA
 A C T G A T C G A C T G A T G C A G T C G T A C A C T G A T G C G T C A A C G T A C T G A G T C A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GSKCCMKSAKGCCGGG
--------AGGCCTNG
 A C T G A T C G A C T G A T G C A G T C G T A C A C T G A T G C G T C A A C G T A C T G A G T C A G T C A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GSKCCMKSAKGCCGGG----
------ACATGCCCGGGCAT
 A C T G A T C G A C T G A T G C A G T C G T A C A C T G A T G C G T C A A C G T A C T G A G T C A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

GCM1/MA0646.1/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GSKCCMKSAKGCCGGG
GTACCCGCATN-----
 A C T G A T C G A C T G A T G C A G T C G T A C A C T G A T G C G T C A A C G T A C T G A G T C A G T C A C T G A C T G A C T G
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GSKCCMKSAKGCCGGG
ATGCCCTGAGGC----
 A C T G A T C G A C T G A T G C A G T C G T A C A C T G A T G C G T C A A C G T A C T G A G T C A G T C A C T G A C T G A C T G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.50
Offset:7
Orientation:forward strand
Alignment:GSKCCMKSAKGCCGGG-
-------GAGSCCGAGC
 A C T G A T C G A C T G A T G C A G T C G T A C A C T G A T G C G T C A A C G T A C T G A G T C A G T C A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.50
Offset:8
Orientation:forward strand
Alignment:GSKCCMKSAKGCCGGG
--------AGGCCTAG
 A C T G A T C G A C T G A T G C A G T C G T A C A C T G A T G C G T C A A C G T A C T G A G T C A G T C A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GSKCCMKSAKGCCGGG
-TGCCCCCGGGCA---
 A C T G A T C G A C T G A T G C A G T C G T A C A C T G A T G C G T C A A C G T A C T G A G T C A G T C A C T G A C T G A C T G
A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GSKCCMKSAKGCCGGG
WTGSCCTSAGGS----
 A C T G A T C G A C T G A T G C A G T C G T A C A C T G A T G C G T C A A C G T A C T G A G T C A G T C A C T G A C T G A C T G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T