Information for 9-SGCTGSCAGC (Motif 24)

T A G C C T A G A G T C A C G T A C T G A T C G A G T C G T C A A C T G A G T C
Reverse Opposite:
C T A G A G T C A C G T A C T G A T G C A G T C T G C A A C T G A G T C A T C G
p-value:1e-5
log p-value:-1.324e+01
Information Content per bp:1.768
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.17%
Number of Background Sequences with motif512.2
Percentage of Background Sequences with motif1.08%
Average Position of motif in Targets53.2 +/- 25.4bp
Average Position of motif in Background49.6 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:SGCTGSCAGC
VGCTGWCAVB
 T A G C C T A G A G T C A C G T A C T G A T C G A G T C G T C A A C T G A G T C
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:SGCTGSCAGC
-CTTGGCAA-
 T A G C C T A G A G T C A C G T A C T G A T C G A G T C G T C A A C T G A G T C
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:SGCTGSCAGC
TNNGGGCAG-
 T A G C C T A G A G T C A C G T A C T G A T C G A G T C G T C A A C T G A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

Myb/MA0100.2/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:SGCTGSCAGC---
---TGGCAGTTGN
 T A G C C T A G A G T C A C G T A C T G A T C G A G T C G T C A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:SGCTGSCAGC
GGTTGGCAT-
 T A G C C T A G A G T C A C G T A C T G A T C G A G T C G T C A A C T G A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----SGCTGSCAGC--
CAATCACTGGCAGAAT
 A C G T A C G T A C G T A C G T T A G C C T A G A G T C A C G T A C T G A T C G A G T C G T C A A C T G A G T C A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:SGCTGSCAGC
-NTTGGCANN
 T A G C C T A G A G T C A C G T A C T G A T C G A G T C G T C A A C T G A G T C
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:SGCTGSCAGC
ARNTGACA--
 T A G C C T A G A G T C A C G T A C T G A T C G A G T C G T C A A C T G A G T C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:SGCTGSCAGC---
---TGGCAGTTGG
 T A G C C T A G A G T C A C G T A C T G A T C G A G T C G T C A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:SGCTGSCAGC
-RHTGWCAR-
 T A G C C T A G A G T C A C G T A C T G A T C G A G T C G T C A A C T G A G T C
A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T