Information for 6-TGGAATGACAGGW (Motif 12)

C G A T A C T G A C T G C T G A G T C A C G A T A C T G C G T A A G T C C G T A A C T G A C T G C G T A
Reverse Opposite:
C G A T A G T C A G T C A C G T A C T G A C G T T G A C C G T A C A G T A G C T A G T C A G T C C G T A
p-value:1e-9
log p-value:-2.168e+01
Information Content per bp:1.853
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.1 +/- 27.8bp
Average Position of motif in Background55.4 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0140.1_Pknox1/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TGGAATGACAGGW----
-GGATTGACAGGTCNTT
 C G A T A C T G A C T G C T G A G T C A C G A T A C T G C G T A A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

PH0105.1_Meis3/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TGGAATGACAGGW----
-GTATTGACAGGTNNTT
 C G A T A C T G A C T G C T G A G T C A C G A T A C T G C G T A A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PH0141.1_Pknox2/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TGGAATGACAGGW----
-NNATTGACAGGTGCTT
 C G A T A C T G A C T G C T G A G T C A C G A T A C T G C G T A A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.73
Offset:4
Orientation:forward strand
Alignment:TGGAATGACAGGW
----TTGACAGC-
 C G A T A C T G A C T G C T G A G T C A C G A T A C T G C G T A A G T C C G T A A C T G A C T G C G T A
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

PH0104.1_Meis2/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TGGAATGACAGGW----
-NTATTGACAGGTNNTN
 C G A T A C T G A C T G C T G A G T C A C G A T A C T G C G T A A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGGAATGACAGGW
NTGATTGACAGN-
 C G A T A C T G A C T G C T G A G T C A C G A T A C T G C G T A A G T C C G T A A C T G A C T G C G T A
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

PH0102.1_Meis1/Jaspar

Match Rank:7
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TGGAATGACAGGW----
-NTATTGACAGCTNNTT
 C G A T A C T G A C T G C T G A G T C A C G A T A C T G C G T A A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.71
Offset:4
Orientation:forward strand
Alignment:TGGAATGACAGGW
----TTGACAGG-
 C G A T A C T G A C T G C T G A G T C A C G A T A C T G C G T A A G T C C G T A A C T G A C T G C G T A
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TGGAATGACAGGW
-TGAGTGACAGSC
 C G A T A C T G A C T G C T G A G T C A C G A T A C T G C G T A A G T C C G T A A C T G A C T G C G T A
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGGAATGACAGGW
BTGABTGACAGS-
 C G A T A C T G A C T G C T G A G T C A C G A T A C T G C G T A A G T C C G T A A C T G A C T G C G T A
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T