Information for 5-GTTTCATSACCTG (Motif 11)

A T C G A C G T G C A T A C G T G T A C G T C A A C G T A T G C C G T A A T G C A T G C C G A T A T C G
Reverse Opposite:
A T G C C G T A A T C G A T C G A C G T T A C G G T C A A C G T A C T G C G T A C G T A C G T A A T G C
p-value:1e-9
log p-value:-2.168e+01
Information Content per bp:1.767
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets59.1 +/- 20.1bp
Average Position of motif in Background52.1 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)-2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTTTCATSACCTG
--NTAATGAGCT-
 A T C G A C G T G C A T A C G T G T A C G T C A A C G T A T G C C G T A A T G C A T G C C G A T A T C G
A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCATSACCTG-
NAATTTTATTACCTNN
 A C G T A C G T A T C G A C G T G C A T A C G T G T A C G T C A A C G T A T G C C G T A A T G C A T G C C G A T A T C G A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

PH0073.1_Hoxc9/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCATSACCTG-
NNAATTAATGACCNNN
 A C G T A C G T A T C G A C G T G C A T A C G T G T A C G T C A A C G T A T G C C G T A A T G C A T G C C G A T A T C G A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

Arid3a/MA0151.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTTTCATSACCTG
-TTTAAT------
 A T C G A C G T G C A T A C G T G T A C G T C A A C G T A T G C C G T A A T G C A T G C C G A T A T C G
A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTTTCATSACCTG
NTTTTATTACN--
 A T C G A C G T G C A T A C G T G T A C G T C A A C G T A T G C C G T A A T G C A T G C C G A T A T C G
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T

MEOX2/MA0706.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTTTCATSACCTG
-NTTAATTACN--
 A T C G A C G T G C A T A C G T G T A C G T C A A C G T A T G C C G T A A T G C A T G C C G A T A T C G
A C G T A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T A C G T A C G T

MNX1/MA0707.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTTTCATSACCTG
-TTTAATTANN--
 A T C G A C G T G C A T A C G T G T A C G T C A A C G T A T G C C G T A A T G C A T G C C G A T A T C G
A C G T C A G T G C A T A C G T G C T A C T G A A C G T C A G T T C G A A T G C G A T C A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTTTCATSACCTG
-TTTAATTGCN--
 A T C G A C G T G C A T A C G T G T A C G T C A A C G T A T G C C G T A A T G C A T G C C G A T A T C G
A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTTTCATSACCTG--
GACGATAATGAGCTTGC
 A C G T A C G T A T C G A C G T G C A T A C G T G T A C G T C A A C G T A T G C C G T A A T G C A T G C C G A T A T C G A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

NKX6-1/MA0674.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTTTCATSACCTG
--TTAATTAN---
 A T C G A C G T G C A T A C G T G T A C G T C A A C G T A T G C C G T A A T G C A T G C C G A T A T C G
A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C A C G T A C G T A C G T