Information for 8-CACGAGAAGA (Motif 20)

T A G C C G T A G T A C A C T G C T G A A C T G C G T A C T G A C T A G C G T A
Reverse Opposite:
A C G T A G T C A G C T A C G T A G T C G A C T A G T C C A T G A C G T A T C G
p-value:1e-8
log p-value:-1.932e+01
Information Content per bp:1.857
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif81.2
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets56.9 +/- 27.1bp
Average Position of motif in Background52.9 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CACGAGAAGA
----NGAAGC
 T A G C C G T A G T A C A C T G C T G A A C T G C G T A C T G A C T A G C G T A
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

Mecom/MA0029.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CACGAGAAGA-----
-AAGATAAGATAACA
 T A G C C G T A G T A C A C T G C T G A A C T G C G T A C T G A C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

Id2/MA0617.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CACGAGAAGA
GCACGTGA---
 A C G T T A G C C G T A G T A C A C T G C T G A A C T G C G T A C T G A C T A G C G T A
T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CACGAGAAGA---
ATTTACGACAAATAGC
 A C G T A C G T A C G T T A G C C G T A G T A C A C T G C T G A A C T G C G T A C T G A C T A G C G T A A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

TFE3/MA0831.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACGAGAAGA
ATCACGTGAC--
 A C G T A C G T T A G C C G T A G T A C A C T G C T G A A C T G C G T A C T G A C T A G C G T A
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CACGAGAAGA--
GNNACCGAGAATNNN
 A C G T A C G T A C G T T A G C C G T A G T A C A C T G C T G A A C T G C G T A C T G A C T A G C G T A A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

Arntl/MA0603.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACGAGAAGA
NCACGTGACN-
 A C G T T A G C C G T A G T A C A C T G C T G A A C T G C G T A C T G A C T A G C G T A
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

Mitf/MA0620.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CACGAGAAGA
GGTCACGTGG---
 A C G T A C G T A C G T T A G C C G T A G T A C A C T G C T G A A C T G C G T A C T G A C T A G C G T A
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T

MLXIPL/MA0664.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CACGAGAAGA
ATCACGTGAT--
 A C G T A C G T T A G C C G T A G T A C A C T G C T G A A C T G C G T A C T G A C T A G C G T A
C T G A C G A T A G T C G T C A A G T C A T C G G C A T A T C G G T C A G A C T A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CACGAGAAGA
GGTCACGTGA---
 A C G T A C G T A C G T T A G C C G T A G T A C A C T G C T G A A C T G C G T A C T G A C T A G C G T A
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T A C G T A C G T