Information for 6-AACAAGCAGG (Motif 16)

T C G A T C G A T G A C T G C A C T G A C T A G T A G C G T C A C T A G C A T G
Reverse Opposite:
G T A C G A T C C A G T A T C G G A T C G A C T A C G T A C T G A G C T A G C T
p-value:1e-8
log p-value:-2.054e+01
Information Content per bp:1.651
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif9.57%
Number of Background Sequences with motif2187.2
Percentage of Background Sequences with motif4.61%
Average Position of motif in Targets48.3 +/- 27.9bp
Average Position of motif in Background49.6 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AACAAGCAGG---
-CACAGCAGGGGG
 T C G A T C G A T G A C T G C A C T G A C T A G T A G C G T C A C T A G C A T G A C G T A C G T A C G T
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AACAAGCAGG
-CCAATCAA-
 T C G A T C G A T G A C T G C A C T G A C T A G T A G C G T C A C T A G C A T G
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AACAAGCAGG
AACAAT----
 T C G A T C G A T G A C T G C A C T G A C T A G T A G C G T C A C T A G C A T G
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AACAAGCAGG---
----AACAGGTGT
 T C G A T C G A T G A C T G C A C T G A C T A G T A G C G T C A C T A G C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AACAAGCAGG
ATGTAAACADGS---
 A C G T A C G T A C G T A C G T A C G T T C G A T C G A T G A C T G C A C T G A C T A G T A G C G T C A C T A G C A T G
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AACAAGCAGG-----
---SDGCAGGTGCNS
 T C G A T C G A T G A C T G C A C T G A C T A G T A G C G T C A C T A G C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AACAAGCAGG
--CACGCA--
 T C G A T C G A T G A C T G C A C T G A C T A G T A G C G T C A C T A G C A T G
A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AACAAGCAGG
GTAAACAAT----
 A C G T A C G T A C G T T C G A T C G A T G A C T G C A C T G A C T A G T A G C G T C A C T A G C A T G
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AACAAGCAGG
NAACAAT----
 A C G T T C G A T C G A T G A C T G C A C T G A C T A G T A G C G T C A C T A G C A T G
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AACAAGCAGG
GTAAACAA-----
 A C G T A C G T A C G T T C G A T C G A T G A C T G C A C T G A C T A G T A G C G T C A C T A G C A T G
C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T