Information for 1-TAGTCCCTCTKCCCAG (Motif 2)

A C G T C T G A A T C G C G A T A G T C A G T C T A G C A C G T A T G C C G A T A C T G A T G C A G T C G T A C C T G A T A C G
Reverse Opposite:
A T G C G A C T A C T G C T A G A T C G T G A C C G T A T A C G C G T A A C T G C T A G C T A G C G T A A T G C G A C T G T C A
p-value:1e-13
log p-value:-3.108e+01
Information Content per bp:1.679
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif24.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets48.9 +/- 18.9bp
Average Position of motif in Background61.6 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:TAGTCCCTCTKCCCAG---
---------TGCCCAGNHW
 A C G T C T G A A T C G C G A T A G T C A G T C T A G C A C G T A T G C C G A T A C T G A T G C A G T C G T A C C T G A T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TAGTCCCTCTKCCCAG
NNAGTCCCACTCNNNN-
 A C G T A C G T C T G A A T C G C G A T A G T C A G T C T A G C A C G T A T G C C G A T A C T G A T G C A G T C G T A C C T G A T A C G
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TAGTCCCTCTKCCCAG
TTGGCANNNTGCCAAG
 A C G T C T G A A T C G C G A T A G T C A G T C T A G C A C G T A T G C C G A T A C T G A T G C A G T C G T A C C T G A T A C G
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:TAGTCCCTCTKCCCAG
------CTGTTCCTGG
 A C G T C T G A A T C G C G A T A G T C A G T C T A G C A C G T A T G C C G A T A C T G A T G C A G T C G T A C C T G A T A C G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TAGTCCCTCTKCCCAG
--VBSYGTCTGG----
 A C G T C T G A A T C G C G A T A G T C A G T C T A G C A C G T A T G C C G A T A C T G A T G C A G T C G T A C C T G A T A C G
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.47
Offset:4
Orientation:forward strand
Alignment:TAGTCCCTCTKCCCAG
----CTGTCTGG----
 A C G T C T G A A T C G C G A T A G T C A G T C T A G C A C G T A T G C C G A T A C T G A T G C A G T C G T A C C T G A T A C G
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.47
Offset:3
Orientation:forward strand
Alignment:TAGTCCCTCTKCCCAG
---GCCATCTGTT---
 A C G T C T G A A T C G C G A T A G T C A G T C T A G C A C G T A T G C C G A T A C T G A T G C A G T C G T A C C T G A T A C G
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:8
Score:0.47
Offset:-6
Orientation:forward strand
Alignment:------TAGTCCCTCTKCCCAG
GATAATTAATCCCTCTT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T C G C G A T A G T C A G T C T A G C A C G T A T G C C G A T A C T G A T G C A G T C G T A C C T G A T A C G
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.47
Offset:7
Orientation:forward strand
Alignment:TAGTCCCTCTKCCCAG-
-------HTTTCCCASG
 A C G T C T G A A T C G C G A T A G T C A G T C T A G C A C G T A T G C C G A T A C T G A T G C A G T C G T A C C T G A T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.46
Offset:8
Orientation:reverse strand
Alignment:TAGTCCCTCTKCCCAG---
--------TTTCCCAGAAN
 A C G T C T G A A T C G C G A T A G T C A G T C T A G C A C G T A T G C C G A T A C T G A T G C A G T C G T A C C T G A T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G