Information for 3-AAACGTTTTTCTTAAA (Motif 3)

C G T A C G T A C T G A A G T C C A T G A C G T C G A T A C G T A C G T A C G T A G T C A C G T C G A T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A G T C A C G T A C G T A G A T C C T A G A G C T A C G T A C G T
p-value:1e-11
log p-value:-2.687e+01
Information Content per bp:1.877
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.0 +/- 25.5bp
Average Position of motif in Background37.2 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AAACGTTTTTCTTAAA-
---NNTTTTTCTTATNT
 C G T A C G T A C T G A A G T C C A T G A C G T C G A T A C G T A C G T A C G T A G T C A C G T C G A T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAACGTTTTTCTTAAA-
NNNNTTTTTTTTTNAAC
 C G T A C G T A C T G A A G T C C A T G A C G T C G A T A C G T A C G T A C G T A G T C A C G T C G A T C G T A C G T A C G T A A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0116.1_Elf3_2/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAACGTTTTTCTTAAA-
GNATTTTTTTTTTGANC
 C G T A C G T A C T G A A G T C C A T G A C G T C G A T A C G T A C G T A C G T A G T C A C G T C G A T C G T A C G T A C G T A A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

PB0063.1_Sox13_1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAACGTTTTTCTTAAA
AANTTATTGTTCTNNA-
 A C G T C G T A C G T A C T G A A G T C C A T G A C G T C G A T A C G T A C G T A C G T A G T C A C G T C G A T C G T A C G T A C G T A
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:AAACGTTTTTCTTAAA--
------NTTTCTNAGAAA
 C G T A C G T A C T G A A G T C C A T G A C G T C G A T A C G T A C G T A C G T A G T C A C G T C G A T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

PB0187.1_Tcf7_2/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AAACGTTTTTCTTAAA---
----NNNTTTNTAATACNG
 C G T A C G T A C T G A A G T C C A T G A C G T C G A T A C G T A C G T A C G T A G T C A C G T C G A T C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PB0001.1_Arid3a_1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AAACGTTTTTCTTAAA---
--NNNTTTTAATTAANNNN
 C G T A C G T A C T G A A G T C C A T G A C G T C G A T A C G T A C G T A C G T A G T C A C G T C G A T C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AAACGTTTTTCTTAAA----
----AAAGCTCGTAAAATTT
 C G T A C G T A C T G A A G T C C A T G A C G T C G A T A C G T A C G T A C G T A G T C A C G T C G A T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

PH0100.1_Lmx1a/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AAACGTTTTTCTTAAA----
---CGAATTAATTAAAAACC
 C G T A C G T A C T G A A G T C C A T G A C G T C G A T A C G T A C G T A C G T A G T C A C G T C G A T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C

PB0075.1_Sp100_1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AAACGTTTTTCTTAAA--
----ATTTTACGGAAAAT
 C G T A C G T A C T G A A G T C C A T G A C G T C G A T A C G T A C G T A C G T A G T C A C G T C G A T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G A T C G A T G C A T G A C T G T C A A T G C A T C G A C T G G C T A C G T A G C T A G C T A C A G T