Information for 12-ATTGTCCTCT (Motif 21)

C G T A A C G T A C G T A C T G A C G T G T A C A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A C T A G C G T A A C T G A C T G C G T A A G T C C G T A G T C A A C G T
p-value:1e-6
log p-value:-1.551e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.6 +/- 33.6bp
Average Position of motif in Background53.8 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---ATTGTCCTCT
CTCATTGTC----
 A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T G T A C A G T C A C G T A G T C A C G T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTCCTCT-
NNTTTATTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T G T A C A G T C A C G T A G T C A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ATTGTCCTCT
CCATTGTTTT--
 A C G T A C G T C G T A A C G T A C G T A C T G A C G T G T A C A G T C A C G T A G T C A C G T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTCCTCT--
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T G T A C A G T C A C G T A G T C A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ATTGTCCTCT
CCATTGTTNY--
 A C G T A C G T C G T A A C G T A C G T A C T G A C G T G T A C A G T C A C G T A G T C A C G T
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----ATTGTCCTCT--
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T G T A C A G T C A C G T A G T C A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:ATTGTCCTCT
--TGACCTYA
 C G T A A C G T A C G T A C T G A C G T G T A C A G T C A C G T A G T C A C G T
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------ATTGTCCTCT
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T G T A C A G T C A C G T A G T C A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ATTGTCCTCT--
TAATTGTTCTAAAC
 A C G T A C G T C G T A A C G T A C G T A C T G A C G T G T A C A G T C A C G T A G T C A C G T A C G T A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ATTGTCCTCT--
TTCAATTGTTCTAAAA
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T G T A C A G T C A C G T A G T C A C G T A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A