Information for 4-VGGAGCAGCTGTCACC (Motif 4)

T C A G T A C G A T C G C G T A A C T G A G T C C G T A A C T G G T A C C G A T A T C G A G C T T G A C G T C A G T A C G T A C
Reverse Opposite:
A C T G A C T G A C G T A C T G T C G A A T G C C G T A A C T G A G T C C G A T A C T G A G T C G A C T A T G C A T G C A G T C
p-value:1e-13
log p-value:-3.177e+01
Information Content per bp:1.752
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.1 +/- 20.8bp
Average Position of motif in Background29.3 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:VGGAGCAGCTGTCACC
-NNAGCAGCTGCT---
 T C A G T A C G A T C G C G T A A C T G A G T C C G T A A C T G G T A C C G A T A T C G A G C T T G A C G T C A G T A C G T A C
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:VGGAGCAGCTGTCACC
---TGCAGCTGTCCCT
 T C A G T A C G A T C G C G T A A C T G A G T C C G T A A C T G G T A C C G A T A T C G A G C T T G A C G T C A G T A C G T A C
A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:VGGAGCAGCTGTCACC
--NNGCAGCTGTC---
 T C A G T A C G A T C G C G T A A C T G A G T C C G T A A C T G G T A C C G A T A T C G A G C T T G A C G T C A G T A C G T A C
A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:VGGAGCAGCTGTCACC
--NNGCAGCTGTT---
 T C A G T A C G A T C G C G T A A C T G A G T C C G T A A C T G G T A C C G A T A T C G A G C T T G A C G T C A G T A C G T A C
A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-VGGAGCAGCTGTCACC
NNNNAGCAGCTGCTGAN
 A C G T T C A G T A C G A T C G C G T A A C T G A G T C C G T A A C T G G T A C C G A T A T C G A G C T T G A C G T C A G T A C G T A C
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:VGGAGCAGCTGTCACC
--CAGCAGCTGN----
 T C A G T A C G A T C G C G T A A C T G A G T C C G T A A C T G G T A C C G A T A T C G A G C T T G A C G T C A G T A C G T A C
A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:VGGAGCAGCTGTCACC
---AGCAGCTGCT---
 T C A G T A C G A T C G C G T A A C T G A G T C C G T A A C T G G T A C C G A T A T C G A G C T T G A C G T C A G T A C G T A C
A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.67
Offset:3
Orientation:forward strand
Alignment:VGGAGCAGCTGTCACC
---ANCAGCTG-----
 T C A G T A C G A T C G C G T A A C T G A G T C C G T A A C T G G T A C C G A T A T C G A G C T T G A C G T C A G T A C G T A C
A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:9
Score:0.66
Offset:2
Orientation:forward strand
Alignment:VGGAGCAGCTGTCACC
--BAACAGCTGT----
 T C A G T A C G A T C G C G T A A C T G A G T C C G T A A C T G G T A C C G A T A T C G A G C T T G A C G T C A G T A C G T A C
A C G T A C G T A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:VGGAGCAGCTGTCACC
----GCAGCTGTNN--
 T C A G T A C G A T C G C G T A A C T G A G T C C G T A A C T G G T A C C G A T A T C G A G C T T G A C G T C A G T A C G T A C
A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T