Information for 1-CATTTTAAAAGAC (Motif 2)

A G T C C G T A A C G T A C G T A G C T C A G T C G T A C G T A C G T A C G T A A C T G C G T A T A G C
Reverse Opposite:
A T C G C G A T G T A C A C G T A C G T A C G T C G A T G C T A C T G A C G T A C G T A A C G T C T A G
p-value:1e-12
log p-value:-2.929e+01
Information Content per bp:1.826
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif14.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets40.3 +/- 19.7bp
Average Position of motif in Background51.4 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CATTTTAAAAGAC
AATATTAATAAAGA-
 A C G T A C G T A G T C C G T A A C G T A C G T A G C T C A G T C G T A C G T A C G T A C G T A A C T G C G T A T A G C
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CATTTTAAAAGAC
NATTCAAAT----
 A G T C C G T A A C G T A C G T A G C T C A G T C G T A C G T A C G T A C G T A A C T G C G T A T A G C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CATTTTAAAAGAC
CGGTTTCAAA---
 A G T C C G T A A C G T A C G T A G C T C A G T C G T A C G T A C G T A C G T A A C T G C G T A T A G C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CATTTTAAAAGAC
AAATAAGAAAAAAC
 A C G T A G T C C G T A A C G T A C G T A G C T C A G T C G T A C G T A C G T A C G T A A C T G C G T A T A G C
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

CEBPA/MA0102.3/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CATTTTAAAAGAC
-ATTGCACAATA-
 A G T C C G T A A C G T A C G T A G C T C A G T C G T A C G T A C G T A C G T A A C T G C G T A T A G C
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CATTTTAAAAGAC
CCGTATTATAAACAA-
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G C T C A G T C G T A C G T A C G T A C G T A A C T G C G T A T A G C
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CATTTTAAAAGAC
-NTTTTACGAGN-
 A G T C C G T A A C G T A C G T A G C T C A G T C G T A C G T A C G T A C G T A A C T G C G T A T A G C
A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CATTTTAAAAGAC--
ATGCTAAAAATAGAA
 A G T C C G T A A C G T A C G T A G C T C A G T C G T A C G T A C G T A C G T A A C T G C G T A T A G C A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CATTTTAAAAGAC----
-ATATCAAAACAAAACA
 A G T C C G T A A C G T A C G T A G C T C A G T C G T A C G T A C G T A C G T A A C T G C G T A T A G C A C G T A C G T A C G T A C G T
A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CATTTTAAAAGAC
ATAACCACTTGAAAATT-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G C T C A G T C G T A C G T A C G T A C G T A A C T G C G T A T A G C
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T A C G T