Information for 6-CGGAGAAAGC (Motif 15)

G A T C C T A G C T A G C G T A A C T G G T C A C T G A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G C T A C G T A G T C A C G T A G T C A G T C C T A G
p-value:1e-6
log p-value:-1.521e+01
Information Content per bp:1.832
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif47.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets35.3 +/- 21.5bp
Average Position of motif in Background55.5 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CGGAGAAAGC-
------CAGCC
 G A T C C T A G C T A G C G T A A C T G G T C A C T G A C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGGAGAAAGC
GAAAGTGAAAGT
 A C G T A C G T G A T C C T A G C T A G C G T A A C T G G T C A C T G A C G T A A C T G A G T C
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGGAGAAAGC
GGAACAAAGR
 G A T C C T A G C T A G C G T A A C T G G T C A C T G A C G T A A C T G A G T C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGGAGAAAGC-----
-GGAGAAAGGTGCGA
 G A T C C T A G C T A G C G T A A C T G G T C A C T G A C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

BCL6B/MA0731.1/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CGGAGAAAGC-
TGAATTCCTAGAAAGCA
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T A G C T A G C G T A A C T G G T C A C T G A C G T A A C T G A G T C A C G T
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGGAGAAAGC
AAAACAAAGG
 G A T C C T A G C T A G C G T A A C T G G T C A C T G A C G T A A C T G A G T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CGGAGAAAGC--
-----CAAGCTT
 G A T C C T A G C T A G C G T A A C T G G T C A C T G A C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGGAGAAAGC-----
GACAGAGATATCAGTGT
 A C G T A C G T G A T C C T A G C T A G C G T A A C T G G T C A C T G A C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGGAGAAAGC---
AAACAGACAAAGGAAT
 A C G T A C G T A C G T G A T C C T A G C T A G C G T A A C T G G T C A C T G A C G T A A C T G A G T C A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGGAGAAAGC-
-AGAGGAAGTG
 G A T C C T A G C T A G C G T A A C T G G T C A C T G A C G T A A C T G A G T C A C G T
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G