Information for 3-CTYRGACCAGCAGAAG (Motif 10)

A G T C A G C T G A C T C T G A A C T G T G C A T A G C A G T C T C G A C A T G A G T C G T C A A C T G C G T A C T G A A C T G
Reverse Opposite:
A G T C A G C T G A C T A G T C A C G T A C T G G T A C A C G T A C T G A C T G A C G T T A G C G A C T C T A G C T G A A C T G
p-value:1e-9
log p-value:-2.247e+01
Information Content per bp:1.717
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif20.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets43.2 +/- 26.5bp
Average Position of motif in Background50.6 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTYRGACCAGCAGAAG---
----DCHCAGCAGGRGGCC
 A G T C A G C T G A C T C T G A A C T G T G C A T A G C A G T C T C G A C A T G A G T C G T C A A C T G C G T A C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CTYRGACCAGCAGAAG-
-----CACAGCAGGGGG
 A G T C A G C T G A C T C T G A A C T G T G C A T A G C A G T C T C G A C A T G A G T C G T C A A C T G C G T A C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CTYRGACCAGCAGAAG
-----ANCAGCTG---
 A G T C A G C T G A C T C T G A A C T G T G C A T A G C A G T C T C G A C A T G A G T C G T C A A C T G C G T A C T G A A C T G
A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTYRGACCAGCAGAAG-
--CCACACAGCAGGAGA
 A G T C A G C T G A C T C T G A A C T G T G C A T A G C A G T C T C G A C A T G A G T C G T C A A C T G C G T A C T G A A C T G A C G T
A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTYRGACCAGCAGAAG-
--CCACACAGCAGGAGA
 A G T C A G C T G A C T C T G A A C T G T G C A T A G C A G T C T C G A C A T G A G T C G T C A A C T G C G T A C T G A A C T G A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTYRGACCAGCAGAAG------
---TGGCCACCAGGGGGCGCTA
 A G T C A G C T G A C T C T G A A C T G T G C A T A G C A G T C T C G A C A T G A G T C G T C A A C T G C G T A C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CTYRGACCAGCAGAAG---------
-----GCCASCAGGGGGCGCYVNNG
 A G T C A G C T G A C T C T G A A C T G T G C A T A G C A G T C T C G A C A T G A G T C G T C A A C T G C G T A C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTYRGACCAGCAGAAG
----NAHCAGCTGD--
 A G T C A G C T G A C T C T G A A C T G T G C A T A G C A G T C T C G A C A T G A G T C G T C A A C T G C G T A C T G A A C T G
A C G T A C G T A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.54
Offset:11
Orientation:reverse strand
Alignment:CTYRGACCAGCAGAAG-
-----------NGAAGC
 A G T C A G C T G A C T C T G A A C T G T G C A T A G C A G T C T C G A C A T G A G T C G T C A A C T G C G T A C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTYRGACCAGCAGAAG-
--GAGCACAGCAGGACA
 A G T C A G C T G A C T C T G A A C T G T G C A T A G C A G T C T C G A C A T G A G T C G T C A A C T G C G T A C T G A A C T G A C G T
A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A