Information for 10-TATTTTAAAA (Motif 21)

A C G T T G C A A C G T C A G T C G A T G A C T T C G A T C G A G T C A G T C A
Reverse Opposite:
C A G T C A G T A G C T A G C T C T G A G C T A G T C A T G C A A C G T T G C A
p-value:1e-5
log p-value:-1.275e+01
Information Content per bp:1.658
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.34%
Number of Background Sequences with motif592.2
Percentage of Background Sequences with motif1.22%
Average Position of motif in Targets44.2 +/- 24.6bp
Average Position of motif in Background48.8 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:TATTTTAAAA---
---TTTGAAACCG
 A C G T T G C A A C G T C A G T C G A T G A C T T C G A T C G A G T C A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TATTTTAAAA
-NATTCAAAT
 A C G T T G C A A C G T C A G T C G A T G A C T T C G A T C G A G T C A G T C A
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TATTTTAAAA
KCTATTTTTRGH
 A C G T A C G T A C G T T G C A A C G T C A G T C G A T G A C T T C G A T C G A G T C A G T C A
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TATTTTAAAA--
TTCTATTTTTAGNNN
 A C G T A C G T A C G T A C G T T G C A A C G T C A G T C G A T G A C T T C G A T C G A G T C A G T C A A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0129.1_Glis2_2/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TATTTTAAAA--
AATATTAATAAAGA
 A C G T A C G T A C G T T G C A A C G T C A G T C G A T G A C T T C G A T C G A G T C A G T C A A C G T A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

PB0187.1_Tcf7_2/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TATTTTAAAA--
CCGTATTATAAACAA
 A C G T A C G T A C G T A C G T T G C A A C G T C A G T C G A T G A C T T C G A T C G A G T C A G T C A A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TATTTTAAAA
CTATTTTTGG-
 A C G T A C G T T G C A A C G T C A G T C G A T G A C T T C G A T C G A G T C A G T C A
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TATTTTAAAA
GCTATTTTTAGC
 A C G T A C G T A C G T T G C A A C G T C A G T C G A T G A C T T C G A T C G A G T C A G T C A
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

Arid3b/MA0601.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TATTTTAAAA--
-ATATTAATTAA
 A C G T T G C A A C G T C A G T C G A T G A C T T C G A T C G A G T C A G T C A A C G T A C G T
A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

PB0174.1_Sox30_2/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TATTTTAAAA---
NCGTATTATAATCNTA
 A C G T A C G T A C G T A C G T T G C A A C G T C A G T C G A T G A C T T C G A T C G A G T C A G T C A A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A