Information for 6-TDCATACTGATGA (Motif 9)

A C G T C A T G A G T C C G T A A G C T C T G A G T A C A C G T A T C G C G T A A C G T A C T G G T C A
Reverse Opposite:
A C G T A G T C C G T A A C G T A T G C C G T A A C T G A G C T C T G A C G A T A C T G G A T C C G T A
p-value:1e-11
log p-value:-2.552e+01
Information Content per bp:1.845
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.2 +/- 20.2bp
Average Position of motif in Background58.4 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TDCATACTGATGA---
------ATGATGCAAT
 A C G T C A T G A G T C C G T A A G C T C T G A G T A C A C G T A T C G C G T A A C G T A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

PB0176.1_Sox5_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TDCATACTGATGA--
NNCTNAATTATGANN
 A C G T C A T G A G T C C G T A A G C T C T G A G T A C A C G T A T C G C G T A A C G T A C T G G T C A A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TDCATACTGATGA---
------MTGATGCAAT
 A C G T C A T G A G T C C G T A A G C T C T G A G T A C A C G T A T C G C G T A A C G T A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TDCATACTGATGA
--CCTGCTGAGH-
 A C G T C A T G A G T C C G T A A G C T C T G A G T A C A C G T A T C G C G T A A C G T A C T G G T C A
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TDCATACTGATGA----
NNNNNATTGATGNGTGN
 A C G T C A T G A G T C C G T A A G C T C T G A G T A C A C G T A T C G C G T A A C G T A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

PB0022.1_Gata5_1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TDCATACTGATGA------
--TAAACTGATAAGAAGAT
 A C G T C A T G A G T C C G T A A G C T C T G A G T A C A C G T A T C G C G T A A C G T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TDCATACTGATGA-
ATGAATATTCATGAG
 A C G T A C G T C A T G A G T C C G T A A G C T C T G A G T A C A C G T A T C G C G T A A C G T A C T G G T C A A C G T
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

MAFK/MA0496.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TDCATACTGATGA-----
---AAANTGCTGACTNAG
 A C G T C A T G A G T C C G T A A G C T C T G A G T A C A C G T A T C G C G T A A C G T A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TDCATACTGATGA--
---AAAATGCTGACT
 A C G T C A T G A G T C C G T A A G C T C T G A G T A C A C G T A T C G C G T A A C G T A C T G G T C A A C G T A C G T
A C G T A C G T A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

PH0017.1_Cux1_2/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TDCATACTGATGA------
----TAATGATGATCACTA
 A C G T C A T G A G T C C G T A A G C T C T G A G T A C A C G T A T C G C G T A A C G T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A