Information for 22-GCAAATGGCCAGAATA (Motif 39)

A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T A G T C A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C T G A G T C
p-value:1e-6
log p-value:-1.454e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets13.0 +/- 4.1bp
Average Position of motif in Background56.8 +/- 4.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCAAATGGCCAGAATA
GTTAATGGCC------
 A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A A C G T C G T A
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCAAATGGCCAGAATA
AACAGATGGC-------
 A C G T A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A A C G T C G T A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GCAAATGGCCAGAATA
AAGGCCAGATGGTCCGG---
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A A C G T C G T A
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GCAAATGGCCAGAATA
TTGGCANNNTGCCAAG---
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A A C G T C G T A
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G A C G T A C G T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCAAATGGCCAGAATA
ACCATATGGC-------
 A C G T A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A A C G T C G T A
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GCAAATGGCCAGAATA
ACATATGG--------
 A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A A C G T C G T A
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GCAAATGGCCAGAATA
-----TGCCCAGNHW-
 A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A A C G T C G T A
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GCAAATGGCCAGAATA
ATATGCAAAT----------
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A A C G T C G T A
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCAAATGGCCAGAATA
AACAKATGGY-------
 A C G T A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A A C G T C G T A
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCAAATGGCCAGAATA
AACAGATGGT-------
 A C G T A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A A C G T C G T A
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T