Information for 20-AAAGBCATGTGGTAAA (Motif 33)

T C G A C T G A C T G A A C T G A T C G T G A C C G T A C G A T C A T G C G A T C T A G C T A G A C G T C G T A C G T A G T C A
Reverse Opposite:
A C G T C G A T C G A T T G C A G A T C A G T C C G T A G T A C G C T A C G A T A C T G T A G C G T A C A G C T A G C T A G C T
p-value:1e-8
log p-value:-1.875e+01
Information Content per bp:1.689
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif68.6
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets41.4 +/- 16.9bp
Average Position of motif in Background51.6 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAAGBCATGTGGTAAA
-AAGGCAAGTGT----
 T C G A C T G A C T G A A C T G A T C G T G A C C G T A C G A T C A T G C G A T C T A G C T A G A C G T C G T A C G T A G T C A
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AAAGBCATGTGGTAAA----
----TAAAGTCGTAAAATAG
 T C G A C T G A C T G A A C T G A T C G T G A C C G T A C G A T C A T G C G A T C T A G C T A G A C G T C G T A C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:AAAGBCATGTGGTAAA
------AGGTGTTAAT
 T C G A C T G A C T G A A C T G A T C G T G A C C G T A C G A T C A T G C G A T C T A G C T A G A C G T C G T A C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

PH0047.1_Hoxa11/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AAAGBCATGTGGTAAA----
----TAAAGTCGTAAAACAT
 T C G A C T G A C T G A A C T G A T C G T G A C C G T A C G A T C A T G C G A T C T A G C T A G A C G T C G T A C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

TFEB/MA0692.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AAAGBCATGTGGTAAA
---GTCACGTGAT---
 T C G A C T G A C T G A A C T G A T C G T G A C C G T A C G A T C A T G C G A T C T A G C T A G A C G T C G T A C G T A G T C A
A C G T A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T A C G T A C G T A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AAAGBCATGTGGTAAA----
----TAAAGTCGTAAAACGT
 T C G A C T G A C T G A A C T G A T C G T G A C C G T A C G A T C A T G C G A T C T A G C T A G A C G T C G T A C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:AAAGBCATGTGGTAAA-
-------NATGGAAAAN
 T C G A C T G A C T G A A C T G A T C G T G A C C G T A C G A T C A T G C G A T C T A G C T A G A C G T C G T A C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAAGBCATGTGGTAAA-----
----TAAGGTCGTAAAATCCT
 T C G A C T G A C T G A A C T G A T C G T G A C C G T A C G A T C A T G C G A T C T A G C T A G A C G T C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:AAAGBCATGTGGTAAA-
-------CSTGGGAAAD
 T C G A C T G A C T G A A C T G A T C G T G A C C G T A C G A T C A T G C G A T C T A G C T A G A C G T C G T A C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AAAGBCATGTGGTAAA
------AGGTGTGAAA
 T C G A C T G A C T G A A C T G A T C G T G A C C G T A C G A T C A T G C G A T C T A G C T A G A C G T C G T A C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A