Information for 16-CTCTTATAATTAA (Motif 32)

A G T C A C G T T A G C A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A G T C A
Reverse Opposite:
A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C G T C G T A C G T A A C T G C G T A A C T G
p-value:1e-8
log p-value:-1.915e+01
Information Content per bp:1.919
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.0 +/- 15.7bp
Average Position of motif in Background43.9 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CTCTTATAATTAA-
NANTATTATAATTNNN
 A C G T A C G T A G T C A C G T T A G C A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A G T C A A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0069.1_Sox21_1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CTCTTATAATTAA-
NNTAATTATAATNANN
 A C G T A C G T A G T C A C G T T A G C A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A G T C A A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CTCTTATAATTAA-
NNTAATTATAATTNNN
 A C G T A C G T A G T C A C G T T A G C A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A G T C A A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PH0103.1_Meox1/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CTCTTATAATTAA---
CTGAGGTAATTACCNC
 A G T C A C G T T A G C A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A G T C A A C G T A C G T A C G T
G A T C C G A T T C A G C T G A C A T G T A C G G A C T T G C A G C T A C A G T A C G T C T G A G T A C G T A C A C G T A G T C

PB0001.1_Arid3a_1/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CTCTTATAATTAA----
NNNTTTTAATTAANNNN
 A G T C A C G T T A G C A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A G T C A A C G T A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

mix-a/MA0621.1/Jaspar

Match Rank:6
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:CTCTTATAATTAA--
----NCTAATTAANN
 A G T C A C G T T A G C A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T

Hoxd3/MA0912.1/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTCTTATAATTAA---
TTGAGTTAATTAACCT
 A G T C A C G T T A G C A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A G T C A A C G T A C G T A C G T
G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

PH0079.1_Hoxd3/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTCTTATAATTAA---
TTGAGTTAATTAACCT
 A G T C A C G T T A G C A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A G T C A A C G T A C G T A C G T
G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

PH0174.1_Vax1/Jaspar

Match Rank:9
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTCTTATAATTAA---
CTNNGNTAATTAACNT
 A G T C A C G T T A G C A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A G T C A A C G T A C G T A C G T
G A T C G C A T C T A G C T A G T C A G A G C T G A C T G T C A G C T A C G A T C A G T C T G A C G T A A G T C A T C G A C G T

PH0143.1_Pou2f1/Jaspar

Match Rank:10
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTCTTATAATTAA---
ATATATTAATTAAGTA
 A G T C A C G T T A G C A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A G T C A A C G T A C G T A C G T
C T G A G A C T C T A G G C A T C T G A G C A T G C A T G T C A C G T A C G A T A C G T G C T A C T G A A C T G G C A T C G T A