Information for 15-AGACTGCCAGGCG (Motif 31)

C G T A A C T G C T G A A G T C A C G T A C T G A T G C A G T C C G T A A T C G A C T G A G T C A C T G
Reverse Opposite:
A G T C C T A G A G T C T A G C C G A T A C T G A T C G A G T C C G T A A C T G A G C T A G T C A C G T
p-value:1e-8
log p-value:-1.970e+01
Information Content per bp:1.899
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.7 +/- 29.4bp
Average Position of motif in Background48.1 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGACTGCCAGGCG
---TTGCCAAG--
 C G T A A C T G C T G A A G T C A C G T A C T G A T G C A G T C C G T A A T C G A C T G A G T C A C T G
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGACTGCCAGGCG
TGAGTGACAGSC-
 C G T A A C T G C T G A A G T C A C G T A C T G A T G C A G T C C G T A A T C G A C T G A G T C A C T G
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGACTGCCAGGCG
NTGATTGACAGN--
 A C G T C G T A A C T G C T G A A G T C A C G T A C T G A T G C A G T C C G T A A T C G A C T G A G T C A C T G
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGACTGCCAGGCG
BTGABTGACAGS--
 A C G T C G T A A C T G C T G A A G T C A C G T A C T G A T G C A G T C C G T A A T C G A C T G A G T C A C T G
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGACTGCCAGGCG----
---GTGCCACGCGACTG
 C G T A A C T G C T G A A G T C A C G T A C T G A T G C A G T C C G T A A T C G A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGACTGCCAGGCG
--VBTGWCAGCB-
 C G T A A C T G C T G A A G T C A C G T A C T G A T G C A G T C C G T A A T C G A C T G A G T C A C T G
A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T

Myb/MA0100.2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGACTGCCAGGCG
CCAACTGCCA----
 A C G T C G T A A C T G C T G A A G T C A C G T A C T G A T G C A G T C C G T A A T C G A C T G A G T C A C T G
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGACTGCCAGGCG---
NNATTGACAGGTGCTT
 C G T A A C T G C T G A A G T C A C G T A C T G A T G C A G T C C G T A A T C G A C T G A G T C A C T G A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGACTGCCAGGCG
TGGCAGNCTGCCAG---
 A C G T A C G T A C G T A C G T C G T A A C T G C T G A A G T C A C G T A C T G A T G C A G T C C G T A A T C G A C T G A G T C A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGACTGCCAGGCG---
----TGTCAGGGGGCG
 C G T A A C T G C T G A A G T C A C G T A C T G A T G C A G T C C G T A A T C G A C T G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G