Information for 1-GCAKGAAGAAAGCTCC (Motif 3)

A C T G G T A C G C T A A C T G C A T G C T G A C T G A C T A G T C G A G T C A C G T A C A T G A G T C C G A T G T A C G T A C
Reverse Opposite:
A C T G C A T G C G T A C T A G G T A C A C G T A C G T A G C T A G T C A G C T A G C T G T A C G T A C C G A T A C T G T G A C
p-value:1e-15
log p-value:-3.473e+01
Information Content per bp:1.686
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.0 +/- 22.1bp
Average Position of motif in Background50.5 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCAKGAAGAAAGCTCC
TACTGGAAAAAAAA---
 A C G T A C T G G T A C G C T A A C T G C A T G C T G A C T G A C T A G T C G A G T C A C G T A C A T G A G T C C G A T G T A C G T A C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCAKGAAGAAAGCTCC--
----GGAGAAAGGTGCGA
 A C T G G T A C G C T A A C T G C A T G C T G A C T G A C T A G T C G A G T C A C G T A C A T G A G T C C G A T G T A C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GCAKGAAGAAAGCTCC
------GGAAATCCCC
 A C T G G T A C G C T A A C T G C A T G C T G A C T G A C T A G T C G A G T C A C G T A C A T G A G T C C G A T G T A C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCAKGAAGAAAGCTCC
---GGAACAAAGR---
 A C T G G T A C G C T A A C T G C A T G C T G A C T G A C T A G T C G A G T C A C G T A C A T G A G T C C G A T G T A C G T A C
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCAKGAAGAAAGCTCC---
--AAGGCGAAATCATCGCA
 A C T G G T A C G C T A A C T G C A T G C T G A C T G A C T A G T C G A G T C A C G T A C A T G A G T C C G A T G T A C G T A C A C G T A C G T A C G T
A C G T A C G T C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GCAKGAAGAAAGCTCC
------GGAAATTCCC
 A C T G G T A C G C T A A C T G C A T G C T G A C T G A C T A G T C G A G T C A C G T A C A T G A G T C C G A T G T A C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GCAKGAAGAAAGCTCC
------GGAAANCCCC
 A C T G G T A C G C T A A C T G C A T G C T G A C T G A C T A G T C G A G T C A C G T A C A T G A G T C C G A T G T A C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCAKGAAGAAAGCTCC
---NGAAGC-------
 A C T G G T A C G C T A A C T G C A T G C T G A C T G A C T A G T C G A G T C A C G T A C A T G A G T C C G A T G T A C G T A C
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCAKGAAGAAAGCTCC
--ATGATGCAAT----
 A C T G G T A C G C T A A C T G C A T G C T G A C T G A C T A G T C G A G T C A C G T A C A T G A G T C C G A T G T A C G T A C
A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCAKGAAGAAAGCTCC
ACAGGAAGTG------
 A C T G G T A C G C T A A C T G C A T G C T G A C T G A C T A G T C G A G T C A C G T A C A T G A G T C C G A T G T A C G T A C
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T