Information for 4-GAMWKCTCMC (Motif 25)

C T A G T C G A T G C A C G T A C A G T T A G C G C A T A T G C G T A C G T A C
Reverse Opposite:
C A T G C A T G T A C G C G T A A T C G G T C A G C A T A C G T A G C T G A T C
p-value:1e-8
log p-value:-2.049e+01
Information Content per bp:1.495
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.7 +/- 19.1bp
Average Position of motif in Background67.8 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAMWKCTCMC
--AAGGTCAC
 C T A G T C G A T G C A C G T A C A G T T A G C G C A T A T G C G T A C G T A C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GAMWKCTCMC---
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T C T A G T C G A T G C A C G T A C A G T T A G C G C A T A T G C G T A C G T A C A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GAMWKCTCMC
ANGNAAAGGTCA-
 A C G T A C G T A C G T C T A G T C G A T G C A C G T A C A G T T A G C G C A T A T G C G T A C G T A C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAMWKCTCMC---
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T C T A G T C G A T G C A C G T A C A G T T A G C G C A T A T G C G T A C G T A C A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GAMWKCTCMC--
------TCCCCA
 C T A G T C G A T G C A C G T A C A G T T A G C G C A T A T G C G T A C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GAMWKCTCMC
----GCTCCG
 C T A G T C G A T G C A C G T A C A G T T A G C G C A T A T G C G T A C G T A C
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAMWKCTCMC
TCAAGGTCAN
 C T A G T C G A T G C A C G T A C A G T T A G C G C A T A T G C G T A C G T A C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAMWKCTCMC-
GGGAAATCCCCN
 A C G T C T A G T C G A T G C A C G T A C A G T T A G C G C A T A T G C G T A C G T A C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAMWKCTCMC
GGAAATTCCC
 C T A G T C G A T G C A C G T A C A G T T A G C G C A T A T G C G T A C G T A C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAMWKCTCMC
CNGTCCTCCC
 C T A G T C G A T G C A C G T A C A G T T A G C G C A T A T G C G T A C G T A C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C