Information for 10-TCTCDTAATCCAT (Motif 18)

A G C T G T A C C G A T A G T C C A G T A C G T C G T A C G T A C G A T A G T C G T A C G T C A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C T G C G T A A C G T A C G T C G T A G T C A C T A G C G T A A C T G C T G A
p-value:1e-9
log p-value:-2.103e+01
Information Content per bp:1.827
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.1 +/- 27.8bp
Average Position of motif in Background43.1 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1/MA0682.1/Jaspar

Match Rank:1
Score:0.73
Offset:4
Orientation:forward strand
Alignment:TCTCDTAATCCAT
----TTAATCCC-
 A G C T G T A C C G A T A G T C C A G T A C G T C G T A C G T A C G A T A G T C G T A C G T C A A C G T
A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:2
Score:0.73
Offset:3
Orientation:forward strand
Alignment:TCTCDTAATCCAT
---NYTAATCCYB
 A G C T G T A C C G A T A G T C C A G T A C G T C G T A C G T A C G A T A G T C G T A C G T C A A C G T
A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PITX3/MA0714.1/Jaspar

Match Rank:3
Score:0.72
Offset:3
Orientation:forward strand
Alignment:TCTCDTAATCCAT
---CTTAATCCC-
 A G C T G T A C C G A T A G T C C A G T A C G T C G T A C G T A C G A T A G T C G T A C G T C A A C G T
A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.72
Offset:5
Orientation:forward strand
Alignment:TCTCDTAATCCAT
-----TAATCCCN
 A G C T G T A C C G A T A G T C C A G T A C G T C G T A C G T A C G A T A G T C G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TCTCDTAATCCAT
---GCTAATCCCC
 A G C T G T A C C G A T A G T C C A G T A C G T C G T A C G T A C G A T A G T C G T A C G T C A A C G T
A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PB0185.1_Tcf1_2/Jaspar

Match Rank:6
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:TCTCDTAATCCAT----
---NNTAATCCNGNCNN
 A G C T G T A C C G A T A G T C C A G T A C G T C G T A C G T A C G A T A G T C G T A C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

OTX2/MA0712.1/Jaspar

Match Rank:7
Score:0.70
Offset:4
Orientation:forward strand
Alignment:TCTCDTAATCCAT
----TTAATCCT-
 A G C T G T A C C G A T A G T C C A G T A C G T C G T A C G T A C G A T A G T C G T A C G T C A A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TCTCDTAATCCAT
---GCTAATCC--
 A G C T G T A C C G A T A G T C C A G T A C G T C G T A C G T A C G A T A G T C G T A C G T C A A C G T
A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:9
Score:0.70
Offset:5
Orientation:forward strand
Alignment:TCTCDTAATCCAT--
-----TAATCGATAA
 A G C T G T A C C G A T A G T C C A G T A C G T C G T A C G T A C G A T A G T C G T A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

CUX2/MA0755.1/Jaspar

Match Rank:10
Score:0.69
Offset:5
Orientation:forward strand
Alignment:TCTCDTAATCCAT--
-----TAATCGATAA
 A G C T G T A C C G A T A G T C C A G T A C G T C G T A C G T A C G A T A G T C G T A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A