Information for 3-TGGGCAAGTC (Motif 16)

C G A T A C T G A C T G C T A G A G T C G T C A G T C A A T C G A C G T A T G C
Reverse Opposite:
A T C G C G T A A T G C C A G T A C G T T C A G A G T C G T A C G T A C C G T A
p-value:1e-9
log p-value:-2.161e+01
Information Content per bp:1.800
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif66.6
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets53.0 +/- 29.2bp
Average Position of motif in Background45.3 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGCAAGTC-
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C T A G A G T C G T C A G T C A A T C G A C G T A T G C A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGGGCAAGTC-
AAGGCAAGTGT
 C G A T A C T G A C T G C T A G A G T C G T C A G T C A A T C G A C G T A T G C A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGGGCAAGTC
NGTGGGCAT---
 A C G T A C G T C G A T A C T G A C T G C T A G A G T C G T C A G T C A A T C G A C G T A T G C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGGGCAAGTC
WDNCTGGGCA----
 A C G T A C G T A C G T A C G T C G A T A C T G A C T G C T A G A G T C G T C A G T C A A T C G A C G T A T G C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGGGCAAGTC
CSTGGGAAAD--
 A C G T A C G T C G A T A C T G A C T G C T A G A G T C G T C A G T C A A T C G A C G T A T G C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGGGCAAGTC
TNNGGGCAG---
 A C G T A C G T C G A T A C T G A C T G C T A G A G T C G T C A G T C A A T C G A C G T A T G C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGGGCAAGTC-
TTAAGAGGAAGTTA
 A C G T A C G T A C G T C G A T A C T G A C T G C T A G A G T C G T C A G T C A A T C G A C G T A T G C A C G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGGGCAAGTC
NNTTGGCANN--
 A C G T A C G T C G A T A C T G A C T G C T A G A G T C G T C A G T C A A T C G A C G T A T G C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGGGCAAGTC--
--GGAAATTCCC
 C G A T A C T G A C T G C T A G A G T C G T C A G T C A A T C G A C G T A T G C A C G T A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGGGCAAGTC
--BGCACGTA
 C G A T A C T G A C T G C T A G A G T C G T C A G T C A A T C G A C G T A T G C
A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A