Information for 11-GAAATGGWAAGTATAT (Motif 15)

C A T G C T G A C G T A C G T A C G A T A C T G T C A G C G A T C T G A C G T A C T A G C G A T C G T A C G A T C T G A C G A T
Reverse Opposite:
C G T A A G C T G C T A A C G T G C T A G A T C G C A T A G C T G C T A A G T C G T A C C G T A G C A T A C G T A G C T G A T C
p-value:1e-9
log p-value:-2.186e+01
Information Content per bp:1.689
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.29%
Number of Background Sequences with motif138.0
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets38.4 +/- 22.8bp
Average Position of motif in Background49.0 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GAAATGGWAAGTATAT
GAAAGTGAAAGT----
 C A T G C T G A C G T A C G T A C G A T A C T G T C A G C G A T C T G A C G T A C T A G C G A T C G T A C G A T C T G A C G A T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GAAATGGWAAGTATAT
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T C A T G C T G A C G T A C G T A C G A T A C T G T C A G C G A T C T G A C G T A C T A G C G A T C G T A C G A T C T G A C G A T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAAATGGWAAGTATAT
GAAACTGAAACT----
 C A T G C T G A C G T A C G T A C G A T A C T G T C A G C G A T C T G A C G T A C T A G C G A T C G T A C G A T C T G A C G A T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAAATGGWAAGTATAT
GAAAMTGAAACT----
 C A T G C T G A C G T A C G T A C G A T A C T G T C A G C G A T C T G A C G T A C T A G C G A T C G T A C G A T C T G A C G A T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAAATGGWAAGTATAT
ACGAAAGCGAAAGT----
 A C G T A C G T C A T G C T G A C G T A C G T A C G A T A C T G T C A G C G A T C T G A C G T A C T A G C G A T C G T A C G A T C T G A C G A T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T A C G T A C G T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAATGGWAAGTATAT
GAAASYGAAASY----
 C A T G C T G A C G T A C G T A C G A T A C T G T C A G C G A T C T G A C G T A C T A G C G A T C G T A C G A T C T G A C G A T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAAATGGWAAGTATAT
GGAAANTGAAACTNA--
 A C G T C A T G C T G A C G T A C G T A C G A T A C T G T C A G C G A T C T G A C G T A C T A G C G A T C G T A C G A T C T G A C G A T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAAATGGWAAGTATAT-
GGAAAGCGAAACCAAAAC
 A C G T C A T G C T G A C G T A C G T A C G A T A C T G T C A G C G A T C T G A C G T A C T A G C G A T C G T A C G A T C T G A C G A T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GAAATGGWAAGTATAT
--AATGGAAAAT----
 C A T G C T G A C G T A C G T A C G A T A C T G T C A G C G A T C T G A C G T A C T A G C G A T C G T A C G A T C T G A C G A T
A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAAATGGWAAGTATAT
AGAAAGTGAAAGTGA--
 A C G T C A T G C T G A C G T A C G T A C G A T A C T G T C A G C G A T C T G A C G T A C T A G C G A T C G T A C G A T C T G A C G A T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T