Information for 7-GCTTCAMGYTCCC (Motif 10)

A C T G A G T C A C G T A C G T A G T C C T G A G T C A A C T G A G C T A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G C T A G A C T G C G T A C T G A T G A C A C G T A G C T A C T G C G T A C G T A A C T G A G T C
p-value:1e-11
log p-value:-2.552e+01
Information Content per bp:1.906
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.7 +/- 28.5bp
Average Position of motif in Background56.3 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCTTCAMGYTCCC
GCTTCC-------
 A C T G A G T C A C G T A C G T A G T C C T G A G T C A A C T G A G C T A C G T A G T C A G T C A G T C
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCTTCAMGYTCCC
AGTTTCAGTTTC--
 A C G T A C T G A G T C A C G T A C G T A G T C C T G A G T C A A C T G A G C T A C G T A G T C A G T C A G T C
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCTTCAMGYTCCC
GKVTCADRTTWC-
 A C T G A G T C A C G T A C G T A G T C C T G A G T C A A C T G A G C T A C G T A G T C A G T C A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

IRF2/MA0051.1/Jaspar

Match Rank:4
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GCTTCAMGYTCCC
GTTTTGCTTTCACTTTCC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A G T C C T G A G T C A A C T G A G C T A C G T A G T C A G T C A G T C
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCTTCAMGYTCCC
TCAGTTTCATTTTCC-
 A C G T A C G T A C G T A C T G A G T C A C G T A C G T A G T C C T G A G T C A A C T G A G C T A C G T A G T C A G T C A G T C
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C A C G T

Esrra/MA0592.2/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCTTCAMGYTCCC
--TTCAAGGTCAT
 A C T G A G T C A C G T A C G T A G T C C T G A G T C A A C T G A G C T A C G T A G T C A G T C A G T C
A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GCTTCAMGYTCCC
-------GCTCCG
 A C T G A G T C A C G T A C G T A G T C C T G A G T C A A C T G A G C T A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCTTCAMGYTCCC
GKMTCADRTTWC-
 A C T G A G T C A C G T A C G T A G T C C T G A G T C A A C T G A G C T A C G T A G T C A G T C A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCTTCAMGYTCCC
ACTTTCACTTTC--
 A C G T A C T G A G T C A C G T A C G T A G T C C T G A G T C A A C T G A G C T A C G T A G T C A G T C A G T C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:GCTTCAMGYTCCC--
---------TCCCCA
 A C T G A G T C A C G T A C G T A G T C C T G A G T C A A C T G A G C T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A