Information for 3-GCAACTGAAACTGTAG (Motif 5)

C T A G T A G C G T C A C G T A A T G C A C G T T C A G G T C A C G T A G C T A G T A C C G A T T A C G A C G T C G T A T C A G
Reverse Opposite:
A G T C G C A T G T C A A G T C C G T A A C T G C A G T A C G T C A G T A G T C T G C A A T C G C G A T A C G T A T C G A G T C
p-value:1e-13
log p-value:-3.219e+01
Information Content per bp:1.666
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif65.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets55.6 +/- 25.5bp
Average Position of motif in Background48.3 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:GCAACTGAAACTGTAG
GAAAMTGAAACT----
 C T A G T A G C G T C A C G T A A T G C A C G T T C A G G T C A C G T A G C T A G T A C C G A T T A C G A C G T C G T A T C A G
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GCAACTGAAACTGTAG
GAAACTGAAACT----
 C T A G T A G C G T C A C G T A A T G C A C G T T C A G G T C A C G T A G C T A G T A C C G A T T A C G A C G T C G T A T C A G
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GCAACTGAAACTGTAG
GRAASTGAAAST----
 C T A G T A G C G T C A C G T A A T G C A C G T T C A G G T C A C G T A G C T A G T A C C G A T T A C G A C G T C G T A T C A G
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:4
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GCAACTGAAACTGTAG
GGAAANTGAAACTNA--
 A C G T C T A G T A G C G T C A C G T A A T G C A C G T T C A G G T C A C G T A G C T A G T A C C G A T T A C G A C G T C G T A T C A G
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GCAACTGAAACTGTAG
GAAAGTGAAAGT----
 C T A G T A G C G T C A C G T A A T G C A C G T T C A G G T C A C G T A G C T A G T A C C G A T T A C G A C G T C G T A T C A G
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GCAACTGAAACTGTAG
GGAAGTGAAAST----
 C T A G T A G C G T C A C G T A A T G C A C G T T C A G G T C A C G T A G C T A G T A C C G A T T A C G A C G T C G T A T C A G
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GCAACTGAAACTGTAG
GAAASYGAAASY----
 C T A G T A G C G T C A C G T A A T G C A C G T T C A G G T C A C G T A G C T A G T A C C G A T T A C G A C G T C G T A T C A G
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T A C G T A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GCAACTGAAACTGTAG
TCGAAACCGAAACT----
 A C G T A C G T C T A G T A G C G T C A C G T A A T G C A C G T T C A G G T C A C G T A G C T A G T A C C G A T T A C G A C G T C G T A T C A G
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:9
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----GCAACTGAAACTGTAG
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T C T A G T A G C G T C A C G T A A T G C A C G T T C A G G T C A C G T A G C T A G T A C C G A T T A C G A C G T C G T A T C A G
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCAACTGAAACTGTAG
CGGAAGTGAAAC-----
 A C G T C T A G T A G C G T C A C G T A A T G C A C G T T C A G G T C A C G T A G C T A G T A C C G A T T A C G A C G T C G T A T C A G
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T A C G T A C G T