Information for 12-ATCTAAAAAT (Motif 47)

C G T A G C A T T A G C G A C T T G C A G C T A C T G A G T C A C T G A A C G T
Reverse Opposite:
T G C A G A C T C A G T G A C T C G A T A C G T C T G A A T C G C G T A G C A T
p-value:1e-3
log p-value:-8.232e+00
Information Content per bp:1.546
Number of Target Sequences with motif108.0
Percentage of Target Sequences with motif14.81%
Number of Background Sequences with motif5174.4
Percentage of Background Sequences with motif10.61%
Average Position of motif in Targets55.0 +/- 26.4bp
Average Position of motif in Background50.3 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2A/MA0052.3/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:ATCTAAAAAT---
-TCTAAAAATAGA
 C G T A G C A T T A G C G A C T T G C A G C T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T
A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-ATCTAAAAAT----
ATGCTAAAAATAGAA
 A C G T C G T A G C A T T A G C G A C T T G C A G C T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

MEF2D/MA0773.1/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:ATCTAAAAAT---
-ACTATAAATAGA
 C G T A G C A T T A G C G A C T T G C A G C T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T
A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:ATCTAAAAAT---
-DCYAAAAATAGM
 C G T A G C A T T A G C G A C T T G C A G C T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T
A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ATCTAAAAAT---
-GCTAAAAATAGC
 C G T A G C A T T A G C G A C T T G C A G C T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T
A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MEF2B/MA0660.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ATCTAAAAAT---
-GCTATAAATAGC
 C G T A G C A T T A G C G A C T T G C A G C T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T
A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

FOXB1/MA0845.1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ATCTAAAAAT
TATGTAAATAT
 A C G T C G T A G C A T T A G C G A C T T G C A G C T A C T G A G T C A C T G A A C G T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

FOXC1/MA0032.2/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATCTAAAAAT
TATGTAAATAT
 A C G T C G T A G C A T T A G C G A C T T G C A G C T A C T G A G T C A C T G A A C G T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATCTAAAAAT---
-KCCAAAAATAGC
 C G T A G C A T T A G C G A C T T G C A G C T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T
A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ATCTAAAAAT--
--CCAAAAATAG
 C G T A G C A T T A G C G A C T T G C A G C T A C T G A G T C A C T G A A C G T A C G T A C G T
A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G