Information for 4-CTGARYCTCTRGA (Motif 4)

A T G C C G A T A T C G G T C A T C A G A G C T A G T C A C G T A G T C A C G T C T A G C A T G C G T A
Reverse Opposite:
A C G T G T A C G A T C C G T A A C T G C G T A A C T G C T G A A G T C C A G T A T G C C G T A A T C G
p-value:1e-14
log p-value:-3.353e+01
Information Content per bp:1.771
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif16.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets58.2 +/- 29.3bp
Average Position of motif in Background43.8 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTGARYCTCTRGA-
----NSCACTYVAV
 A T G C C G A T A T C G G T C A T C A G A G C T A G T C A C G T A G T C A C G T C T A G C A T G C G T A A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CTGARYCTCTRGA--
-----TGTCTAGACG
 A T G C C G A T A T C G G T C A T C A G A G C T A G T C A C G T A G T C A C G T C T A G C A T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

ZBTB18/MA0698.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTGARYCTCTRGA--
--NAACATCTGGATN
 A T G C C G A T A T C G G T C A T C A G A G C T A G T C A C G T A G T C A C G T C T A G C A T G C G T A A C G T A C G T
A C G T A C G T T C A G G T C A C T G A A G T C T G C A C A G T T A G C G C A T C A T G A C T G T G C A G C A T C A T G

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTGARYCTCTRGA
---AACATCTGGA
 A T G C C G A T A T C G G T C A T C A G A G C T A G T C A C G T A G T C A C G T C T A G C A T G C G T A
A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CTGARYCTCTRGA------
----NGNTCTAGAACCNGV
 A T G C C G A T A T C G G T C A T C A G A G C T A G T C A C G T A G T C A C G T C T A G C A T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

PH0113.1_Nkx2-4/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGARYCTCTRGA----
-TAAGCCACTTGAAATT
 A T G C C G A T A T C G G T C A T C A G A G C T A G T C A C G T A G T C A C G T C T A G C A T G C G T A A C G T A C G T A C G T A C G T
A C G T G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

PH0171.1_Nkx2-1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGARYCTCTRGA----
-TAAGCCACTTGAAATT
 A T G C C G A T A T C G G T C A T C A G A G C T A G T C A C G T A G T C A C G T C T A G C A T G C G T A A C G T A C G T A C G T A C G T
A C G T A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTGARYCTCTRGA-
----RSCACTYRAG
 A T G C C G A T A T C G G T C A T C A G A G C T A G T C A C G T A G T C A C G T C T A G C A T G C G T A A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTGARYCTCTRGA
---AASCACTCAA
 A T G C C G A T A T C G G T C A T C A G A G C T A G T C A C G T A G T C A C G T C T A G C A T G C G T A
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTGARYCTCTRGA-----
-ATAACCACTTGAAAATT
 A T G C C G A T A T C G G T C A T C A G A G C T A G T C A C G T A G T C A C G T C T A G C A T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T