Information for 23-TAGAACTTGAATYTWG (Motif 35)

G A C T C G T A A T C G C G T A C G T A G A T C A C G T A C G T T C A G C G T A C G T A A C G T A G T C C G A T C G T A T C A G
Reverse Opposite:
A G T C C G A T C G T A T C A G G T C A A C G T A C G T A G T C C G T A C G T A C A T G C G A T C G A T A T G C A C G T C G T A
p-value:1e-8
log p-value:-2.001e+01
Information Content per bp:1.738
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.2 +/- 19.8bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TAGAACTTGAATYTWG
----ATTTGAATT---
 G A C T C G T A A T C G C G T A C G T A G A T C A C G T A C G T T C A G C G T A C G T A A C G T A G T C C G A T C G T A T C A G
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TAGAACTTGAATYTWG
TTTTAAGTACTTAAATT---
 A C G T A C G T A C G T A C G T G A C T C G T A A T C G C G T A C G T A G A T C A C G T A C G T T C A G C G T A C G T A A C G T A G T C C G A T C G T A T C A G
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T A C G T A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TAGAACTTGAATYTWG
TACTAAGTACTTAAATG---
 A C G T A C G T A C G T A C G T G A C T C G T A A T C G C G T A C G T A G A T C A C G T A C G T T C A G C G T A C G T A A C G T A G T C C G A T C G T A T C A G
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TAGAACTTGAATYTWG-
-NNNTATTGAATTGNNN
 G A C T C G T A A T C G C G T A C G T A G A T C A C G T A C G T T C A G C G T A C G T A A C G T A G T C C G A T C G T A T C A G A C G T
A C G T T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TAGAACTTGAATYTWG
-----TTTGAAACCG-
 G A C T C G T A A T C G C G T A C G T A G A T C A C G T A C G T T C A G C G T A C G T A A C G T A G T C C G A T C G T A T C A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TAGAACTTGAATYTWG
CNTTAAGTACTTAANG----
 A C G T A C G T A C G T A C G T G A C T C G T A A T C G C G T A C G T A G A T C A C G T A C G T T C A G C G T A C G T A A C G T A G T C C G A T C G T A T C A G
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G A C G T A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TAGAACTTGAATYTWG
TAAGCCACTTGAATTT--
 A C G T A C G T G A C T C G T A A T C G C G T A C G T A G A T C A C G T A C G T T C A G C G T A C G T A A C G T A G T C C G A T C G T A T C A G
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TAGAACTTGAATYTWG---
---NNNNTGAATTCANNNC
 G A C T C G T A A T C G C G T A C G T A G A T C A C G T A C G T T C A G C G T A C G T A A C G T A G T C C G A T C G T A T C A G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

PH0111.1_Nkx2-2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TAGAACTTGAATYTWG
ATAACCACTTGAAAATT-
 A C G T A C G T G A C T C G T A A T C G C G T A C G T A G A T C A C G T A C G T T C A G C G T A C G T A A C G T A G T C C G A T C G T A T C A G
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TAGAACTTGAATYTWG
------TTGACTTTT-
 G A C T C G T A A T C G C G T A C G T A G A T C A C G T A C G T T C A G C G T A C G T A A C G T A G T C C G A T C G T A T C A G
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T